Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.77□□□□□ -1.49
VAMP4O75379 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VAMP4O75379 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.77□□□□□ -1.49
VAMP4O75379 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.77□□□□□ -1.49
VAMP4O75379 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.77□□□□□ -1.49
VAMP4O75379 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.77□□□□□ -1.49
VAMP4O75379 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.77□□□□□ -1.49
VAMP4O75379 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.77□□□□□ -1.49
VAMP4O75379 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.77□□□□□ -1.49
VAMP4O75379 BNIP3P8-201ENST00000597863 560 ntBASIC5.77□□□□□ -1.49
VAMP4O75379 AC103710.1-201ENST00000610003 901 ntBASIC5.77□□□□□ -1.49
VAMP4O75379 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.77□□□□□ -1.49
VAMP4O75379 CASC19-204ENST00000641001 2055 ntBASIC5.77□□□□□ -1.49
VAMP4O75379 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VAMP4O75379 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VAMP4O75379 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VAMP4O75379 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VAMP4O75379 AC133552.1-201ENST00000569988 4007 ntBASIC5.77□□□□□ -1.49
VAMP4O75379 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.76□□□□□ -1.49
VAMP4O75379 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VAMP4O75379 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 AC139769.1-204ENST00000472297 1931 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.76□□□□□ -1.49
VAMP4O75379 SMG1P4-204ENST00000523028 4131 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AC090017.1-201ENST00000548612 1779 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.76□□□□□ -1.49
VAMP4O75379 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VAMP4O75379 Y_RNA.9-201ENST00000362354 101 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 RNU4-12P-201ENST00000365233 139 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VAMP4O75379 SNORD115-47-201ENST00000391226 86 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.76□□□□□ -1.49
VAMP4O75379 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.76□□□□□ -1.49
VAMP4O75379 AL158073.1-201ENST00000426848 1104 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 RPS12P10-201ENST00000427031 377 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AC068287.1-201ENST00000430283 295 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.76□□□□□ -1.49
VAMP4O75379 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.76□□□□□ -1.49
VAMP4O75379 AC004865.1-201ENST00000442276 1003 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 TRGVB-201ENST00000453257 471 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 MTND2P24-201ENST00000453434 806 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.76□□□□□ -1.49
VAMP4O75379 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.76□□□□□ -1.49
VAMP4O75379 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.76□□□□□ -1.49
VAMP4O75379 FAM92A1P2-202ENST00000504766 877 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.76□□□□□ -1.49
VAMP4O75379 RN7SKP46-201ENST00000515942 234 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AF279873.1-201ENST00000523393 313 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AC068587.4-201ENST00000533893 186 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.76□□□□□ -1.49
VAMP4O75379 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.76□□□□□ -1.49
VAMP4O75379 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.76□□□□□ -1.49
VAMP4O75379 MIR5096-201ENST00000583713 70 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.76□□□□□ -1.49
VAMP4O75379 AC019193.2-201ENST00000610012 634 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AL359535.1-201ENST00000612100 1087 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 AP001506.1-201ENST00000615444 211 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 AP003400.5-201ENST00000624827 617 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 NXPH1-205ENST00000602349 1953 ntBASIC5.76□□□□□ -1.49
VAMP4O75379 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VAMP4O75379 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
VAMP4O75379 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAMP4O75379 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.75□□□□□ -1.49
VAMP4O75379 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.75□□□□□ -1.49
VAMP4O75379 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VAMP4O75379 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VAMP4O75379 AC126755.2-208ENST00000327792 462 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 AC138969.1-213ENST00000331436 462 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 SNRPEP3-201ENST00000338402 276 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VAMP4O75379 Y_RNA.256-201ENST00000364594 104 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VAMP4O75379 FGF7P8-201ENST00000402994 292 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 RNU2-65P-201ENST00000410162 185 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 AL356387.2-201ENST00000422272 243 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 AC007742.1-201ENST00000425789 329 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.75□□□□□ -1.49
VAMP4O75379 ELOCP26-201ENST00000436067 329 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.75□□□□□ -1.49
VAMP4O75379 USP9YP12-201ENST00000450481 570 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms