Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 CYCSP10-201ENST00000417973 294 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 MRPS36P1-201ENST00000421291 307 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 RPS12P5-201ENST00000423449 371 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 RFC5P1-201ENST00000454419 874 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 FTH1P2-201ENST00000466086 412 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 GAPDHP36-201ENST00000480688 918 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 RN7SL323P-201ENST00000494712 295 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 MTCYBP16-201ENST00000509187 1129 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC109471.1-201ENST00000511631 612 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 COX6B1P6-201ENST00000522347 255 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 HSPE1P5-201ENST00000561489 272 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC022069.1-201ENST00000582910 658 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC005255.1-201ENST00000593748 216 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC131235.4-201ENST00000609288 620 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC128687.2-201ENST00000609657 566 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC121761.2-201ENST00000617300 689 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC009237.17-201ENST00000618111 748 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC116618.1-201ENST00000634617 774 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC068620.4-201ENST00000636730 1182 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 ASNSP1-204ENST00000641977 1664 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 RNU6-839P-201ENST00000363347 108 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC016907.1-201ENST00000419483 435 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL365203.2-201ENST00000423444 196 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 YWHAZP7-201ENST00000436906 631 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL109741.2-201ENST00000455561 343 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 VPS26AP1-201ENST00000483197 979 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 RPF2P2-201ENST00000504693 896 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 WBP1LP4-201ENST00000505043 344 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC010587.2-201ENST00000511727 448 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 RNU6-759P-201ENST00000516740 103 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC087808.1-201ENST00000520501 361 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC008562.1-201ENST00000521763 330 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC005832.3-201ENST00000537929 631 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC004217.3-201ENST00000551552 878 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC002400.1-201ENST00000569310 726 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL390816.3-201ENST00000604527 1066 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AP003973.1-201ENST00000604639 691 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC106791.2-201ENST00000604680 391 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC072039.2-201ENST00000608883 439 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AL139089.1-201ENST00000620372 975 ntBASIC4.17□□□□□ -1.74
SIX4Q9UIU6 AC139792.2-201ENST00000624218 587 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms