Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC245054.1-201ENST00000420944 258 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC007435.1-201ENST00000421086 415 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 USP9YP11-201ENST00000427537 717 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AL008629.1-201ENST00000438615 184 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 HMGB1P48-201ENST00000446155 598 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AL591623.2-201ENST00000449978 222 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 TPMTP4-201ENST00000450749 678 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 RNU6-1218P-201ENST00000458990 108 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC093755.1-201ENST00000512950 1023 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 OSBPL9P5-201ENST00000542581 171 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AL121766.1-201ENST00000547436 487 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 NBEAP1-201ENST00000554452 979 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 MIR3160-1-201ENST00000577972 85 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC008088.1-201ENST00000580993 280 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC022916.3-201ENST00000592961 742 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC124856.1-201ENST00000600819 896 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AL137072.1-201ENST00000603444 466 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC069545.1-201ENST00000605671 358 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AP004247.3-201ENST00000608682 624 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC243654.2-201ENST00000612843 443 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 BX005019.1-201ENST00000561881 1810 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC012321.1-201ENST00000561622 1588 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC093775.1-201ENST00000624154 1868 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC009313.2-201ENST00000417893 1941 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 HMGB1P5-201ENST00000255320 642 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 Y_RNA.192-201ENST00000363977 102 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 RNU6-560P-201ENST00000364007 108 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 Y_RNA.465-201ENST00000384293 102 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC007066.1-201ENST00000392902 381 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 RPL32P23-201ENST00000397237 405 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 MTND4P22-201ENST00000413116 1169 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 RPL30P2-201ENST00000414021 291 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC017079.2-201ENST00000416102 485 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 RPS26P40-201ENST00000435209 294 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AL450263.2-201ENST00000439400 589 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 MTND2P22-201ENST00000444325 1033 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 NPM1P39-201ENST00000449818 867 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC243772.1-201ENST00000451620 410 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC133473.1-201ENST00000455173 299 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 RPS27P23-201ENST00000487608 251 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC010486.2-201ENST00000505572 483 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AP001317.1-201ENST00000531194 960 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC010198.2-201ENST00000550612 259 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 MIR5685-201ENST00000579080 79 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC115085.1-201ENST00000588924 229 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC013444.2-201ENST00000603317 787 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AL732618.1-201ENST00000623251 301 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC012020.1-201ENST00000624541 1728 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC119674.1-207ENST00000641355 633 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms