Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.57□□□□□ -1.68
TOPBP1Q92547 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.57□□□□□ -1.68
TOPBP1Q92547 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.57□□□□□ -1.68
TOPBP1Q92547 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
TOPBP1Q92547 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TOPBP1Q92547 SNORA36C-201ENST00000384289 132 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 RPL32P35-201ENST00000415214 394 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 SRIP2-201ENST00000428470 166 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 AC104058.1-201ENST00000448028 297 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.56□□□□□ -1.68
TOPBP1Q92547 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.56□□□□□ -1.68
TOPBP1Q92547 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.56□□□□□ -1.68
TOPBP1Q92547 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOPBP1Q92547 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TOPBP1Q92547 RNU1-75P-201ENST00000347264 129 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 MIR512-1-201ENST00000384913 84 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 MRPS33P4-201ENST00000434892 317 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TOPBP1Q92547 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.56□□□□□ -1.68
TOPBP1Q92547 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.56□□□□□ -1.68
TOPBP1Q92547 IGKV2D-23-201ENST00000518179 286 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.56□□□□□ -1.68
TOPBP1Q92547 AL442163.2-201ENST00000553912 710 ntBASIC4.56□□□□□ -1.68
TOPBP1Q92547 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.56□□□□□ -1.68
TOPBP1Q92547 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOPBP1Q92547 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TOPBP1Q92547 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TOPBP1Q92547 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TOPBP1Q92547 LINC01355-201ENST00000566551 5444 ntBASIC4.55□□□□□ -1.68
TOPBP1Q92547 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TOPBP1Q92547 MIR1289-2-201ENST00000408360 111 ntBASIC4.55□□□□□ -1.68
TOPBP1Q92547 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.55□□□□□ -1.68
TOPBP1Q92547 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.55□□□□□ -1.68
TOPBP1Q92547 OR10D4P-201ENST00000525892 951 ntBASIC4.55□□□□□ -1.68
TOPBP1Q92547 AC243972.3-201ENST00000539655 198 ntBASIC4.55□□□□□ -1.68
TOPBP1Q92547 AC007621.1-201ENST00000604544 437 ntBASIC4.55□□□□□ -1.68
TOPBP1Q92547 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.55□□□□□ -1.68
TOPBP1Q92547 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TOPBP1Q92547 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TOPBP1Q92547 MTCO1P7-201ENST00000419523 1542 ntBASIC4.54□□□□□ -1.68
TOPBP1Q92547 ELL2P4-201ENST00000446870 1376 ntBASIC4.54□□□□□ -1.68
TOPBP1Q92547 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TOPBP1Q92547 RNU6-618P-201ENST00000363518 112 ntBASIC4.54□□□□□ -1.68
TOPBP1Q92547 RPL30P2-201ENST00000414021 291 ntBASIC4.54□□□□□ -1.68
TOPBP1Q92547 RPL23AP15-201ENST00000450202 459 ntBASIC4.54□□□□□ -1.68
TOPBP1Q92547 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.54□□□□□ -1.68
TOPBP1Q92547 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.54□□□□□ -1.68
TOPBP1Q92547 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.54□□□□□ -1.68
TOPBP1Q92547 AP003102.1-201ENST00000525638 661 ntBASIC4.54□□□□□ -1.68
TOPBP1Q92547 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.54□□□□□ -1.68
TOPBP1Q92547 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.54□□□□□ -1.68
TOPBP1Q92547 AL355493.4-201ENST00000618530 292 ntBASIC4.54□□□□□ -1.68
TOPBP1Q92547 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TOPBP1Q92547 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TOPBP1Q92547 AC012078.1-201ENST00000405035 1646 ntBASIC4.53□□□□□ -1.68
TOPBP1Q92547 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TOPBP1Q92547 Z98742.3-201ENST00000418637 326 ntBASIC4.53□□□□□ -1.68
TOPBP1Q92547 OR2AS1P-201ENST00000427827 319 ntBASIC4.53□□□□□ -1.68
TOPBP1Q92547 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
TOPBP1Q92547 AC009263.1-201ENST00000441193 1239 ntBASIC4.53□□□□□ -1.68
TOPBP1Q92547 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.53□□□□□ -1.68
TOPBP1Q92547 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.53□□□□□ -1.68
TOPBP1Q92547 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TOPBP1Q92547 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.53□□□□□ -1.68
TOPBP1Q92547 AC078899.3-201ENST00000599065 212 ntBASIC4.53□□□□□ -1.68
TOPBP1Q92547 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TOPBP1Q92547 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.53□□□□□ -1.68
TOPBP1Q92547 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TOPBP1Q92547 AC092593.1-201ENST00000515413 1815 ntBASIC4.53□□□□□ -1.68
TOPBP1Q92547 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.53□□□□□ -1.68
TOPBP1Q92547 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TOPBP1Q92547 SNORD56.3-201ENST00000363507 71 ntBASIC4.52□□□□□ -1.69
TOPBP1Q92547 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOPBP1Q92547 AL139415.2-201ENST00000431968 163 ntBASIC4.52□□□□□ -1.69
TOPBP1Q92547 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.52□□□□□ -1.69
TOPBP1Q92547 AC008565.1-201ENST00000509046 885 ntBASIC4.52□□□□□ -1.69
TOPBP1Q92547 FAM60DP-201ENST00000524174 632 ntBASIC4.52□□□□□ -1.69
TOPBP1Q92547 AC007424.1-203ENST00000554613 687 ntBASIC4.52□□□□□ -1.69
TOPBP1Q92547 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TOPBP1Q92547 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TOPBP1Q92547 HMGB3P12-201ENST00000438745 556 ntBASIC4.51□□□□□ -1.69
TOPBP1Q92547 AC092013.1-201ENST00000438795 332 ntBASIC4.51□□□□□ -1.69
TOPBP1Q92547 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.51□□□□□ -1.69
TOPBP1Q92547 Y_RNA.676-201ENST00000516393 96 ntBASIC4.51□□□□□ -1.69
TOPBP1Q92547 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.51□□□□□ -1.69
TOPBP1Q92547 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TOPBP1Q92547 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TOPBP1Q92547 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TOPBP1Q92547 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.51□□□□□ -1.69
TOPBP1Q92547 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TOPBP1Q92547 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TOPBP1Q92547 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TOPBP1Q92547 RNU1-35P-201ENST00000362782 153 ntBASIC4.51□□□□□ -1.69
TOPBP1Q92547 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TOPBP1Q92547 SNORA46-201ENST00000384762 135 ntBASIC4.51□□□□□ -1.69
TOPBP1Q92547 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.51□□□□□ -1.69
TOPBP1Q92547 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.51□□□□□ -1.69
TOPBP1Q92547 ATP5F1P5-201ENST00000526403 760 ntBASIC4.51□□□□□ -1.69
TOPBP1Q92547 DEFB122-202ENST00000569013 197 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms