Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 AP000619.3-201ENST00000535634 1127 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC004217.3-201ENST00000551552 878 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC090312.2-201ENST00000582687 378 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC006130.2-201ENST00000586202 326 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC146944.4-201ENST00000602697 718 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 AP004247.3-201ENST00000608682 624 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC131235.4-201ENST00000609288 620 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 AL603755.1-201ENST00000619504 163 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TM9SF4Q92544 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TM9SF4Q92544 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC018555.1-201ENST00000567548 1980 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 AL118496.1-201ENST00000440201 1812 ntBASIC3.91□□□□□ -1.78
TM9SF4Q92544 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.91□□□□□ -1.78
TM9SF4Q92544 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TM9SF4Q92544 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
TM9SF4Q92544 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
TM9SF4Q92544 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TM9SF4Q92544 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TM9SF4Q92544 AL049737.1-201ENST00000413920 1403 ntBASIC3.9□□□□□ -1.78
TM9SF4Q92544 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 HMGB1P5-201ENST00000255320 642 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 RNU6-839P-201ENST00000363347 108 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 SNORD66.1-201ENST00000391230 76 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 MIR1179-201ENST00000408703 91 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 RNU6ATAC-201ENST00000408749 126 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 RN7SKP159-201ENST00000410657 292 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AL139421.1-201ENST00000423010 169 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 DPRXP1-201ENST00000426312 460 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 Z93242.1-201ENST00000427102 353 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 RPL7P4-203ENST00000430239 730 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 RFC5P1-201ENST00000454419 874 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 VN1R105P-201ENST00000486595 910 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC011352.3-201ENST00000505162 593 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC017037.1-201ENST00000508460 471 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 MTCYBP16-201ENST00000509187 1129 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 HSPE1P23-201ENST00000509838 286 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC008494.2-201ENST00000514544 370 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC115085.1-201ENST00000588924 229 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 BNIP3P26-201ENST00000600827 554 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 MIR6867-201ENST00000610636 67 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TM9SF4Q92544 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC009090.3-201ENST00000616553 565 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 MIR6875-201ENST00000617506 72 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC007546.1-201ENST00000619452 559 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC116618.1-201ENST00000634617 774 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC092162.3-201ENST00000624511 1624 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TM9SF4Q92544 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TM9SF4Q92544 ZNF542P-204ENST00000482727 1305 ntBASIC3.9□□□□□ -1.79
TM9SF4Q92544 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.9□□□□□ -1.79
TM9SF4Q92544 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF4Q92544 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF4Q92544 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms