Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 OSBPL9P4-201ENST00000371707 1800 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VARS2Q5ST30 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VARS2Q5ST30 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VARS2Q5ST30 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC005839.1-201ENST00000624148 3213 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 LINC01613-201ENST00000561476 2780 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VARS2Q5ST30 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC138393.1-203ENST00000327086 343 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 RNA5SP485-201ENST00000365053 119 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 RNU1-84P-201ENST00000365447 164 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 Y_RNA.504-201ENST00000384481 104 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 AL133384.1-201ENST00000412744 351 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC005229.2-201ENST00000456995 399 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 RN7SL39P-201ENST00000462264 297 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC112484.3-201ENST00000505910 329 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC007016.1-201ENST00000512110 244 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 RNU6-488P-201ENST00000515918 99 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC100784.1-201ENST00000522790 310 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC090281.1-201ENST00000523019 276 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC127455.1-201ENST00000565496 145 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 MIR4443-201ENST00000585052 53 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 MIR6721-201ENST00000617181 87 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 AC010325.3-201ENST00000641084 394 ntBASIC7.05□□□□□ -1.28
VARS2Q5ST30 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VARS2Q5ST30 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
VARS2Q5ST30 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 RNA5SP258-201ENST00000362750 119 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 RNU6-270P-201ENST00000364131 105 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 CRP-202ENST00000368110 667 ntTSL 3 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 RNU6-429P-201ENST00000384582 108 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 TMEM167AP1-201ENST00000423409 219 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 PRUNEP1-201ENST00000425846 705 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC073069.1-201ENST00000428657 441 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 HSPE1P25-201ENST00000455484 251 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 RN7SL717P-201ENST00000478343 297 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC012123.2-201ENST00000485809 248 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VARS2Q5ST30 ACA59.1-201ENST00000515966 143 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 RNY3P16-201ENST00000516338 101 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 RNU6-1234P-201ENST00000516877 103 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 IGKV3D-34-201ENST00000522638 302 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AP004242.1-201ENST00000533701 349 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 H3F3AP1-201ENST00000559984 334 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 MIR5582-201ENST00000579697 68 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.04□□□□□ -1.28
VARS2Q5ST30 AL158827.2-201ENST00000602494 330 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC004805.3-201ENST00000603178 310 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 MIR7973-1-201ENST00000614683 76 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC131009.3-201ENST00000621809 287 ntBASIC7.04□□□□□ -1.28
VARS2Q5ST30 AC120057.5-201ENST00000623840 154 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms