Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCH1Q13635 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCH1Q13635 Y_RNA.638-201ENST00000459374 113 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 HMGB1P3-201ENST00000502802 616 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCH1Q13635 YWHAEP4-201ENST00000505390 198 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 RNU6-1004P-201ENST00000516584 111 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCH1Q13635 AC090281.1-201ENST00000523019 276 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AC090819.1-201ENST00000523800 1111 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 MIR4319-201ENST00000577285 85 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 MIR4512-201ENST00000583257 77 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCH1Q13635 AL096803.3-201ENST00000609032 532 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCH1Q13635 uc_338.1-201ENST00000612113 180 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 uc_338.32-201ENST00000615087 172 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AC123768.4-201ENST00000616244 701 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 LINC00216-201ENST00000623548 1126 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 IGHVIII-44-202ENST00000636235 289 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AC139713.2-210ENST00000641741 992 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
PTCH1Q13635 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PTCH1Q13635 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCH1Q13635 SNORA71.1-201ENST00000364523 117 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
PTCH1Q13635 RNU4-31P-201ENST00000384211 141 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 RPL31P52-201ENST00000407532 367 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 RNA5SP184-201ENST00000411071 108 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AL445528.1-201ENST00000426330 420 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCH1Q13635 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PTCH1Q13635 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCH1Q13635 AC010683.1-201ENST00000473673 378 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 TRBV8-2-201ENST00000475637 270 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 RPL7P47-201ENST00000497299 556 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCH1Q13635 AC017037.2-201ENST00000513850 890 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCH1Q13635 AC023158.1-201ENST00000561632 1025 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCH1Q13635 ELOCP29-201ENST00000588193 334 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AC067852.4-201ENST00000590314 478 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 Z82195.1-201ENST00000604558 398 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCH1Q13635 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 AC116563.2-201ENST00000624751 535 ntBASIC4.38□□□□□ -1.71
PTCH1Q13635 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PTCH1Q13635 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCH1Q13635 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCH1Q13635 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
PTCH1Q13635 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCH1Q13635 OR52B1P-201ENST00000316506 909 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCH1Q13635 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTCH1Q13635 EEF1A1P41-201ENST00000414667 207 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 AL513174.1-201ENST00000423182 629 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 ETF1P3-201ENST00000430422 1160 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 MRPS33P4-201ENST00000434892 317 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 AL031663.1-201ENST00000437445 219 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 AC093156.1-201ENST00000440382 670 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.37□□□□□ -1.71
PTCH1Q13635 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.37□□□□□ -1.71
PTCH1Q13635 AC117440.1-201ENST00000474107 571 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 AC093770.1-201ENST00000511559 571 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 VTA1P2-201ENST00000520205 911 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCH1Q13635 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCH1Q13635 VN1R84P-201ENST00000593697 235 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCH1Q13635 PRELID3BP8-201ENST00000604148 295 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 AC055764.2-201ENST00000610089 670 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 AP006248.2-201ENST00000623309 592 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCH1Q13635 AC093311.1-201ENST00000506586 2021 ntBASIC4.37□□□□□ -1.71
PTCH1Q13635 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PTCH1Q13635 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PTCH1Q13635 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCH1Q13635 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCH1Q13635 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PTCH1Q13635 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCH1Q13635 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCH1Q13635 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCH1Q13635 AC000403.1-201ENST00000613696 3585 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCH1Q13635 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCH1Q13635 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PTCH1Q13635 AL356968.1-201ENST00000416622 474 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 Z99127.3-201ENST00000448158 395 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 HMGB3P21-201ENST00000452483 547 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 HMGB1P26-201ENST00000452520 628 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 SUMO1P1-201ENST00000497904 306 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 SNORD116-26-201ENST00000516006 96 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 RNU6-889P-201ENST00000517189 103 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 AC009812.2-201ENST00000517657 457 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 AC022784.5-201ENST00000522241 437 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.36□□□□□ -1.71
PTCH1Q13635 AC091544.4-201ENST00000555268 342 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 MIR548Y-201ENST00000582739 110 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 ATP1B3P1-201ENST00000605365 821 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms