Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC12P31275 AC018638.8-201ENST00000588755 281 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 AL590099.1-201ENST00000615276 138 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC12P31275 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
HOXC12P31275 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.09□□□□□ -1.6
HOXC12P31275 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HOXC12P31275 AC093591.2-201ENST00000565254 3843 ntBASIC5.09□□□□□ -1.6
HOXC12P31275 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.09□□□□□ -1.6
HOXC12P31275 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HOXC12P31275 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
HOXC12P31275 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HOXC12P31275 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 AC015813.6-201ENST00000624409 5808 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HOXC12P31275 OR1S2-201ENST00000302592 978 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 NACAP2-201ENST00000318548 624 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 Y_RNA.509-201ENST00000384506 99 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC12P31275 RN7SKP216-201ENST00000411050 312 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 RNU6-373P-201ENST00000411247 98 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 RPL12P9-201ENST00000412942 488 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 RPL31P2-201ENST00000413849 377 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 SNRPFP1-201ENST00000414761 252 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 SDCBPP3-201ENST00000419629 891 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 RPL12P17-201ENST00000432393 498 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC12P31275 RAC1P7-201ENST00000445367 377 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 OR7E116P-201ENST00000448529 957 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 AL353691.1-201ENST00000451332 387 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC12P31275 RPS20P24-201ENST00000457473 361 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 RNU7-63P-201ENST00000459054 62 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 RPS3AP50-201ENST00000487064 803 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC12P31275 HMGB1P21-201ENST00000502313 581 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.08□□□□□ -1.6
HOXC12P31275 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC12P31275 RPS3AP23-202ENST00000574601 686 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC12P31275 AC010424.2-201ENST00000607594 443 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 uc_338.12-201ENST00000616344 181 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 MTND1P37-201ENST00000636562 264 ntBASIC5.08□□□□□ -1.6
HOXC12P31275 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HOXC12P31275 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC12P31275 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC12P31275 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
HOXC12P31275 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC12P31275 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HOXC12P31275 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC12P31275 AC025470.1-201ENST00000510053 2032 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC12P31275 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC12P31275 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXC12P31275 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXC12P31275 RPS4XP5-202ENST00000449995 1334 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXC12P31275 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms