Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR7154-201ENST00000620673 73 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.28□□□□□ -2.2
USH2AO75445 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.28□□□□□ -2.2
USH2AO75445 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
USH2AO75445 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
USH2AO75445 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
USH2AO75445 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 AC107081.1-201ENST00000414975 361 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AC007677.1-201ENST00000445757 515 ntBASIC1.28□□□□□ -2.2
USH2AO75445 RPL12P26-201ENST00000452430 487 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AC090525.1-201ENST00000479116 478 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AC107398.1-201ENST00000486904 505 ntBASIC1.28□□□□□ -2.2
USH2AO75445 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC1.28□□□□□ -2.2
USH2AO75445 YWHAEP7-203ENST00000622054 312 ntBASIC1.28□□□□□ -2.2
USH2AO75445 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 USP44-208ENST00000552440 1818 ntTSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC1.28□□□□□ -2.2
USH2AO75445 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
USH2AO75445 RNU1-17P-201ENST00000363022 152 ntBASIC1.28□□□□□ -2.21
USH2AO75445 RPL31P45-201ENST00000419532 356 ntBASIC1.28□□□□□ -2.21
USH2AO75445 AC087499.2-201ENST00000432861 149 ntBASIC1.28□□□□□ -2.21
USH2AO75445 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.28□□□□□ -2.21
USH2AO75445 PRDX3P4-201ENST00000470828 747 ntBASIC1.28□□□□□ -2.21
USH2AO75445 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
USH2AO75445 AC002984.1-201ENST00000591692 448 ntBASIC1.28□□□□□ -2.21
USH2AO75445 RMST_2.1-201ENST00000617263 136 ntBASIC1.28□□□□□ -2.21
USH2AO75445 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC1.28□□□□□ -2.21
USH2AO75445 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC1.28□□□□□ -2.21
USH2AO75445 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC1.28□□□□□ -2.21
USH2AO75445 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.21
USH2AO75445 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC1.27□□□□□ -2.21
USH2AO75445 AC110754.1-201ENST00000399740 601 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AL162389.1-201ENST00000449233 177 ntBASIC1.27□□□□□ -2.21
USH2AO75445 RPL12P25-201ENST00000455592 494 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC034244.2-201ENST00000514668 858 ntBASIC1.27□□□□□ -2.21
USH2AO75445 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC1.27□□□□□ -2.21
USH2AO75445 AC074029.1-201ENST00000552531 1044 ntBASIC1.27□□□□□ -2.21
USH2AO75445 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC1.27□□□□□ -2.21
USH2AO75445 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
USH2AO75445 AL353684.1-201ENST00000622677 1120 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC106730.3-201ENST00000624568 641 ntBASIC1.27□□□□□ -2.21
USH2AO75445 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.27□□□□□ -2.21
USH2AO75445 SNORA17.3-201ENST00000391159 129 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.27□□□□□ -2.21
USH2AO75445 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 OR2B8P-201ENST00000432841 938 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC011816.1-201ENST00000441346 546 ntBASIC1.27□□□□□ -2.21
USH2AO75445 HMGN1P5-201ENST00000448591 263 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC078817.1-201ENST00000492623 435 ntBASIC1.27□□□□□ -2.21
USH2AO75445 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC1.27□□□□□ -2.21
USH2AO75445 AC025881.1-201ENST00000518851 512 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC1.27□□□□□ -2.21
USH2AO75445 AP003385.6-201ENST00000531603 374 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC103810.6-201ENST00000606708 136 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC233309.1-201ENST00000619522 751 ntBASIC1.27□□□□□ -2.21
USH2AO75445 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC1.27□□□□□ -2.21
USH2AO75445 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 AL356057.3-201ENST00000402607 340 ntBASIC1.27□□□□□ -2.21
USH2AO75445 RNA5SP270-201ENST00000411361 118 ntBASIC1.27□□□□□ -2.21
USH2AO75445 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC1.27□□□□□ -2.21
USH2AO75445 RPL9P6-201ENST00000492764 598 ntBASIC1.27□□□□□ -2.21
USH2AO75445 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.27□□□□□ -2.21
USH2AO75445 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC1.27□□□□□ -2.21
USH2AO75445 RN7SKP209-201ENST00000516888 304 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.27□□□□□ -2.21
USH2AO75445 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC1.27□□□□□ -2.21
USH2AO75445 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.27□□□□□ -2.21
USH2AO75445 AC009039.2-201ENST00000624524 529 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC027290.2-201ENST00000623210 18662 ntBASIC1.27□□□□□ -2.21
USH2AO75445 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.27□□□□□ -2.21
USH2AO75445 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 MIR337-201ENST00000362281 93 ntBASIC1.27□□□□□ -2.21
USH2AO75445 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
USH2AO75445 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 AL353729.1-201ENST00000425044 720 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC108667.1-201ENST00000428618 249 ntBASIC1.27□□□□□ -2.21
USH2AO75445 ELOCP18-201ENST00000434209 337 ntBASIC1.27□□□□□ -2.21
USH2AO75445 ANP32BP2-201ENST00000454525 545 ntBASIC1.27□□□□□ -2.21
USH2AO75445 AC108860.1-201ENST00000484521 383 ntBASIC1.27□□□□□ -2.21
USH2AO75445 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.27□□□□□ -2.21
USH2AO75445 AC009852.2-201ENST00000567898 485 ntBASIC1.27□□□□□ -2.21
USH2AO75445 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.27□□□□□ -2.21
USH2AO75445 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.27□□□□□ -2.21
USH2AO75445 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.27□□□□□ -2.21
USH2AO75445 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
USH2AO75445 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
USH2AO75445 AC092435.4-201ENST00000623012 4159 ntBASIC1.27□□□□□ -2.21
USH2AO75445 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 MIR513A2-201ENST00000385249 127 ntBASIC1.26□□□□□ -2.21
USH2AO75445 CYCSP49-201ENST00000420810 319 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms