Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC141002.1-201ENST00000607025 279 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC245517.5-201ENST00000611529 162 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 ATP5A1P2-202ENST00000616464 443 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 U6.114-201ENST00000636407 96 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 AC022325.1-201ENST00000502748 2199 ntBASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 AL355834.1-201ENST00000556602 3965 ntBASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 MSL3P1-202ENST00000440028 1468 ntBASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LYSMD3Q7Z3D4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AL022323.4-201ENST00000623980 13120 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 RNU5A-8P-201ENST00000364102 114 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 SNORA20.1-201ENST00000364790 130 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 Y_RNA.555-201ENST00000384673 110 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 MT-TW-201ENST00000387382 68 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 U3.20-201ENST00000390909 217 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 MIR548I2-201ENST00000408348 149 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 Y_RNA.594-201ENST00000410373 140 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 E2F6P2-201ENST00000420708 748 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC130360.1-201ENST00000425489 1117 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC115283.1-201ENST00000427353 400 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AL389925.1-201ENST00000432257 728 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AL590664.1-201ENST00000448065 339 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AL162388.1-201ENST00000450912 352 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 HMGB3P30-201ENST00000457863 606 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC079804.1-201ENST00000461922 436 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 RPL21P93-201ENST00000480465 489 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC025465.3-201ENST00000510570 311 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 EIF3KP3-201ENST00000514461 639 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 RNU6-120P-201ENST00000516077 103 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 RN7SKP35-201ENST00000517210 151 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC130365.2-201ENST00000525882 1201 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 HMGB3P26-201ENST00000560051 582 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC007494.1-201ENST00000562293 760 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 IGHV3-29-201ENST00000604817 344 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 RN7SL261P-201ENST00000613441 282 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC022031.1-201ENST00000585985 2593 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 AC087516.1-201ENST00000561236 2428 ntBASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LYSMD3Q7Z3D4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 CASC19-284ENST00000642142 1868 ntBASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 RNU6-562P-201ENST00000362731 107 ntBASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 RNU1-134P-201ENST00000362935 165 ntBASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 Y_RNA.106-201ENST00000363189 100 ntBASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 RPSAP35-201ENST00000413753 818 ntBASIC6.13□□□□□ -1.43
LYSMD3Q7Z3D4 OR6E1P-201ENST00000414424 923 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms