Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN20P56880 COX6CP17-201ENST00000421389 185 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 NIPA2P1-201ENST00000426223 976 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 COX6CP15-201ENST00000426313 211 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN20P56880 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN20P56880 RPEP2-201ENST00000432149 701 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 AC114495.1-201ENST00000441274 436 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 HMGB3P22-202ENST00000451823 572 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN20P56880 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 AC116533.1-201ENST00000459748 321 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC010468.1-201ENST00000461022 817 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 RN7SL303P-201ENST00000469773 251 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 BZW1P2-201ENST00000473537 826 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 AC093281.2-201ENST00000510153 597 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN20P56880 AC104057.1-201ENST00000515547 497 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 RNU6-583P-201ENST00000516012 92 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 OR5BC1P-201ENST00000529327 739 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN20P56880 KPNA2P3-201ENST00000584190 848 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 AC114878.2-201ENST00000604863 1251 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 Z98200.1-201ENST00000607298 470 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC072039.2-201ENST00000608883 439 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN20P56880 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC083809.1-201ENST00000615051 472 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 MLECP1-201ENST00000615893 709 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN20P56880 uc_338.13-201ENST00000618243 179 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLDN20P56880 AC007546.2-201ENST00000623996 360 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN20P56880 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.94□□□□□ -1.78
CLDN20P56880 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 AL031985.3-201ENST00000565390 2449 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN20P56880 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 AL122126.1-201ENST00000546905 1318 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN20P56880 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN20P56880 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN20P56880 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CLDN20P56880 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN20P56880 AC006971.1-201ENST00000407916 4486 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CLDN20P56880 LINC00561-201ENST00000565815 2738 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 RNA5SP307-201ENST00000362863 116 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN20P56880 AL583835.1-201ENST00000399570 407 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 AC097374.1-203ENST00000400783 485 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN20P56880 PIGPP2-201ENST00000411569 458 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 USP9YP33-201ENST00000412220 421 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN20P56880 RPS23P10-201ENST00000416185 486 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN20P56880 AL365338.1-201ENST00000422282 858 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 NPM1P34-201ENST00000428821 893 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 AL390023.1-201ENST00000428836 262 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 USP9YP35-201ENST00000435696 412 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN20P56880 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN20P56880 AC092427.1-201ENST00000439177 601 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 RPL23AP52-201ENST00000439311 478 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN20P56880 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN20P56880 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN20P56880 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN20P56880 RPL26P28-201ENST00000451325 435 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 VN1R32P-201ENST00000452234 905 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN20P56880 IFNWP4-201ENST00000453148 294 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN20P56880 TRBV26-201ENST00000456572 344 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 AL122001.1-201ENST00000457027 370 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 AC092757.1-201ENST00000467293 467 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 RPL35AP15-201ENST00000468042 339 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 RN7SL860P-201ENST00000473738 223 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN20P56880 AC083829.1-201ENST00000503756 657 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN20P56880 AC111000.2-201ENST00000507775 550 ntBASIC3.93□□□□□ -1.78
CLDN20P56880 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms