Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 HMGN1P5-201ENST00000448591 263 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 RPL29P29-201ENST00000448725 423 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC146507.1-201ENST00000468335 354 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC087879.1-201ENST00000474343 374 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 HMGN1P15-201ENST00000513870 295 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 RNA5SP179-201ENST00000517284 121 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 HMGB1P1-201ENST00000522557 636 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC104115.2-201ENST00000523026 687 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC023825.1-201ENST00000566704 1030 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 BPTFP1-201ENST00000579209 492 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 MIR3138-201ENST00000585238 82 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC091167.4-201ENST00000605079 184 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 RNA5SP108-201ENST00000605921 117 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 HMGN2P28-201ENST00000606102 262 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 RNU4-89P-201ENST00000607443 133 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AL445567.2-201ENST00000618935 498 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC093875.1-201ENST00000623688 504 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 BX649567.1-201ENST00000642071 1134 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
HLA-DQA1P01909 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RNU5B-1-201ENST00000363286 116 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 SNORD56.3-201ENST00000363507 71 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 MCTS2P-201ENST00000394552 546 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AL022722.2-201ENST00000402519 180 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AL355379.1-201ENST00000405542 640 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RNU2-37P-201ENST00000410695 177 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RNU4-6P-201ENST00000410804 122 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC008280.1-201ENST00000418851 412 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC005517.2-201ENST00000424673 553 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 COX6CP15-201ENST00000426313 211 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 ISCA1P2-201ENST00000438679 421 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AL357552.1-201ENST00000445254 415 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AL590399.6-201ENST00000446396 307 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RPL7P59-201ENST00000447700 943 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RPS11P1-201ENST00000451072 473 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RPL23AP67-201ENST00000465341 474 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC010618.1-201ENST00000469924 477 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RPS17P11-201ENST00000474297 293 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AP000563.1-201ENST00000490865 758 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC109471.1-201ENST00000511631 612 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC119751.1-201ENST00000513357 765 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 MTCO1P30-201ENST00000515244 580 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 MTCO1P35-201ENST00000515270 228 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC112198.4-201ENST00000515450 351 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RNU6-579P-201ENST00000516879 102 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 IGKV2D-36-201ENST00000518643 226 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC245166.1-201ENST00000521012 253 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC104027.1-201ENST00000521887 300 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AP003730.1-201ENST00000524605 285 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 OR5D17P-201ENST00000531492 978 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 YPEL5P3-201ENST00000547227 352 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 CYB5AP5-201ENST00000549779 389 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC112503.1-201ENST00000608436 391 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms