Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX3O60493 CYCSP29-201ENST00000533731 318 ntBASIC3.78□□□□□ -1.8
SNX3O60493 PCNPP1-201ENST00000552501 511 ntBASIC3.78□□□□□ -1.8
SNX3O60493 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
SNX3O60493 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX3O60493 AC090695.1-201ENST00000561269 1222 ntBASIC3.78□□□□□ -1.8
SNX3O60493 SULT1C2P1-202ENST00000562418 459 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX3O60493 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX3O60493 AC007566.2-201ENST00000603642 413 ntBASIC3.78□□□□□ -1.8
SNX3O60493 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX3O60493 AC090948.1-201ENST00000607464 549 ntBASIC3.78□□□□□ -1.8
SNX3O60493 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX3O60493 AC133644.2-201ENST00000608142 540 ntBASIC3.78□□□□□ -1.8
SNX3O60493 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX3O60493 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX3O60493 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SNX3O60493 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX3O60493 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX3O60493 NMD3P1-201ENST00000439704 1488 ntBASIC3.78□□□□□ -1.8
SNX3O60493 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX3O60493 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 AC107982.1-201ENST00000507171 1300 ntBASIC3.77□□□□□ -1.81
SNX3O60493 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 Y_RNA.192-201ENST00000363977 102 ntBASIC3.77□□□□□ -1.81
SNX3O60493 RNA5SP87-201ENST00000384155 118 ntBASIC3.77□□□□□ -1.81
SNX3O60493 Y_RNA.465-201ENST00000384293 102 ntBASIC3.77□□□□□ -1.81
SNX3O60493 MIR105-2-201ENST00000385083 81 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AL136116.1-201ENST00000403591 381 ntBASIC3.77□□□□□ -1.81
SNX3O60493 RNU2-28P-201ENST00000410457 189 ntBASIC3.77□□□□□ -1.81
SNX3O60493 HSPE1P12-201ENST00000412576 301 ntBASIC3.77□□□□□ -1.81
SNX3O60493 RPL31P2-201ENST00000413849 377 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX3O60493 COX6B1P7-201ENST00000430845 235 ntBASIC3.77□□□□□ -1.81
SNX3O60493 USP9YP31-201ENST00000431405 881 ntBASIC3.77□□□□□ -1.81
SNX3O60493 KCTD10P1-201ENST00000434203 625 ntBASIC3.77□□□□□ -1.81
SNX3O60493 RPL23AP16-201ENST00000441715 421 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.77□□□□□ -1.81
SNX3O60493 RN7SL329P-201ENST00000467740 299 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AC074386.1-201ENST00000476560 767 ntBASIC3.77□□□□□ -1.81
SNX3O60493 ACTG1P13-201ENST00000486987 1043 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.77□□□□□ -1.81
SNX3O60493 AC068305.1-201ENST00000497406 726 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AC091951.3-201ENST00000504093 246 ntBASIC3.77□□□□□ -1.81
SNX3O60493 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX3O60493 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.77□□□□□ -1.81
SNX3O60493 AC092470.1-201ENST00000546187 132 ntBASIC3.77□□□□□ -1.81
SNX3O60493 LSM6P2-201ENST00000552208 177 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AL389895.1-201ENST00000554127 252 ntBASIC3.77□□□□□ -1.81
SNX3O60493 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX3O60493 TVP23BP1-201ENST00000557500 617 ntBASIC3.77□□□□□ -1.81
SNX3O60493 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.77□□□□□ -1.81
SNX3O60493 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.77□□□□□ -1.81
SNX3O60493 BNIP3P38-201ENST00000601117 544 ntBASIC3.77□□□□□ -1.81
SNX3O60493 LLPHP1-201ENST00000603571 367 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AP001521.1-201ENST00000609150 300 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AC092106.3-201ENST00000611308 722 ntBASIC3.77□□□□□ -1.81
SNX3O60493 uc_338.32-201ENST00000615087 172 ntBASIC3.77□□□□□ -1.81
SNX3O60493 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.77□□□□□ -1.81
SNX3O60493 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX3O60493 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.77□□□□□ -1.81
SNX3O60493 AC009452.1-201ENST00000640823 606 ntBASIC3.77□□□□□ -1.81
SNX3O60493 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 AC009951.1-201ENST00000623674 2614 ntBASIC3.77□□□□□ -1.81
SNX3O60493 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.77□□□□□ -1.81
SNX3O60493 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 AC058791.1-201ENST00000608412 3198 ntBASIC3.77□□□□□ -1.81
SNX3O60493 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX3O60493 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX3O60493 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.76□□□□□ -1.81
SNX3O60493 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNX3O60493 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SNX3O60493 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNX3O60493 Y_RNA.25-201ENST00000362528 102 ntBASIC3.76□□□□□ -1.81
SNX3O60493 RNA5SP443-201ENST00000363083 132 ntBASIC3.76□□□□□ -1.81
SNX3O60493 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNX3O60493 MIR199A2-201ENST00000385289 110 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AL023807.1-201ENST00000407932 359 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX3O60493 RPL31P45-201ENST00000419532 356 ntBASIC3.76□□□□□ -1.81
SNX3O60493 RPL31P12-201ENST00000422587 358 ntBASIC3.76□□□□□ -1.81
SNX3O60493 VN1R54P-201ENST00000435210 1049 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX3O60493 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.76□□□□□ -1.81
SNX3O60493 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.76□□□□□ -1.81
SNX3O60493 Z73417.1-201ENST00000447373 778 ntBASIC3.76□□□□□ -1.81
SNX3O60493 MTCO1P48-201ENST00000448024 1096 ntBASIC3.76□□□□□ -1.81
SNX3O60493 RPS11P1-201ENST00000451072 473 ntBASIC3.76□□□□□ -1.81
SNX3O60493 RN7SL860P-201ENST00000473738 223 ntBASIC3.76□□□□□ -1.81
SNX3O60493 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms