Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RPA2P1-201ENST00000556557 721 ntBASIC6.89□□□□□ -1.31
ACTN4O43707 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.89□□□□□ -1.31
ACTN4O43707 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.89□□□□□ -1.31
ACTN4O43707 AC005899.2-201ENST00000584353 90 ntBASIC6.89□□□□□ -1.31
ACTN4O43707 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.89□□□□□ -1.31
ACTN4O43707 HMGB2P1-201ENST00000591146 634 ntBASIC6.89□□□□□ -1.31
ACTN4O43707 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.89□□□□□ -1.31
ACTN4O43707 AC141002.1-201ENST00000607025 279 ntBASIC6.89□□□□□ -1.31
ACTN4O43707 MIR6811-201ENST00000620409 58 ntBASIC6.89□□□□□ -1.31
ACTN4O43707 AC055839.1-201ENST00000634467 498 ntBASIC6.89□□□□□ -1.31
ACTN4O43707 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.89□□□□□ -1.31
ACTN4O43707 SAMMSON-213ENST00000641336 1521 ntBASIC6.89□□□□□ -1.31
ACTN4O43707 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
ACTN4O43707 AC010401.2-201ENST00000575137 4934 ntBASIC6.89□□□□□ -1.31
ACTN4O43707 CASC19-284ENST00000642142 1868 ntBASIC6.89□□□□□ -1.31
ACTN4O43707 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ACTN4O43707 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ACTN4O43707 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ACTN4O43707 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.89□□□□□ -1.31
ACTN4O43707 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ACTN4O43707 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
ACTN4O43707 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.88□□□□□ -1.31
ACTN4O43707 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.88□□□□□ -1.31
ACTN4O43707 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
ACTN4O43707 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 TPTE2P4-201ENST00000258589 1605 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 RNU6-128P-201ENST00000383976 107 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 RNU6-190P-201ENST00000384154 102 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 SNORA77.2-201ENST00000408571 112 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.88□□□□□ -1.31
ACTN4O43707 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.88□□□□□ -1.31
ACTN4O43707 AL590233.1-201ENST00000430017 456 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 RPEP4-201ENST00000437636 602 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 RPL21P89-201ENST00000444021 467 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 RPS18P1-201ENST00000447840 458 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.88□□□□□ -1.31
ACTN4O43707 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.88□□□□□ -1.31
ACTN4O43707 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.88□□□□□ -1.31
ACTN4O43707 RN7SL809P-201ENST00000482040 297 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 AC021382.1-201ENST00000483523 359 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 DEFB109F-201ENST00000491870 277 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 AC104806.1-201ENST00000508720 308 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.88□□□□□ -1.31
ACTN4O43707 TBCAP3-201ENST00000512475 312 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.88□□□□□ -1.31
ACTN4O43707 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.88□□□□□ -1.31
ACTN4O43707 AC012368.3-201ENST00000604190 219 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 AC004792.1-201ENST00000614523 137 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.88□□□□□ -1.31
ACTN4O43707 AC069234.4-201ENST00000621276 412 ntBASIC6.88□□□□□ -1.31
ACTN4O43707 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.88□□□□□ -1.31
ACTN4O43707 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.88□□□□□ -1.31
ACTN4O43707 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.88□□□□□ -1.31
ACTN4O43707 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.88□□□□□ -1.31
ACTN4O43707 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
ACTN4O43707 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.88□□□□□ -1.31
ACTN4O43707 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
ACTN4O43707 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 AC016583.1-201ENST00000624221 2431 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
ACTN4O43707 RNU6-511P-201ENST00000363496 107 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 Y_RNA.314-201ENST00000365114 102 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 RNA5SP240-201ENST00000365355 128 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ACTN4O43707 RNU6-886P-201ENST00000384319 105 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 Y_RNA.576-201ENST00000384781 102 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 MIR19A-201ENST00000384878 82 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
ACTN4O43707 DSTNP4-201ENST00000399472 474 ntBASIC6.87□□□□□ -1.31
ACTN4O43707 AL133260.1-201ENST00000405720 405 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms