Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
SGCEO43556 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
SGCEO43556 ZNF285B-201ENST00000561698 1767 ntBASIC3.07□□□□□ -1.92
SGCEO43556 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.07□□□□□ -1.92
SGCEO43556 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SGCEO43556 SAGE4P-201ENST00000442271 3381 ntBASIC3.07□□□□□ -1.92
SGCEO43556 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.07□□□□□ -1.92
SGCEO43556 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SGCEO43556 RNU1-75P-201ENST00000347264 129 ntBASIC3.07□□□□□ -1.92
SGCEO43556 FRG1CP-201ENST00000358464 769 ntBASIC3.07□□□□□ -1.92
SGCEO43556 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SGCEO43556 AP002088.1-201ENST00000382740 395 ntBASIC3.07□□□□□ -1.92
SGCEO43556 AL121972.1-201ENST00000402023 252 ntBASIC3.07□□□□□ -1.92
SGCEO43556 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.07□□□□□ -1.92
SGCEO43556 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SGCEO43556 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 BX679664.1-201ENST00000434429 253 ntBASIC3.07□□□□□ -1.92
SGCEO43556 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.07□□□□□ -1.92
SGCEO43556 ELOCP3-201ENST00000439303 348 ntBASIC3.07□□□□□ -1.92
SGCEO43556 AL357552.1-201ENST00000445254 415 ntBASIC3.07□□□□□ -1.92
SGCEO43556 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.07□□□□□ -1.92
SGCEO43556 RN7SL283P-201ENST00000489055 303 ntBASIC3.07□□□□□ -1.92
SGCEO43556 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 RNU1-95P-201ENST00000516357 160 ntBASIC3.07□□□□□ -1.92
SGCEO43556 SNORA70.18-201ENST00000516696 98 ntBASIC3.07□□□□□ -1.92
SGCEO43556 RNU1-128P-201ENST00000516704 160 ntBASIC3.07□□□□□ -1.92
SGCEO43556 RNU1-45P-201ENST00000517191 141 ntBASIC3.07□□□□□ -1.92
SGCEO43556 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 PAICSP4-201ENST00000517543 1253 ntBASIC3.07□□□□□ -1.92
SGCEO43556 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 AC068657.1-201ENST00000520807 306 ntBASIC3.07□□□□□ -1.92
SGCEO43556 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.07□□□□□ -1.92
SGCEO43556 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.07□□□□□ -1.92
SGCEO43556 AC026333.2-201ENST00000542164 106 ntBASIC3.07□□□□□ -1.92
SGCEO43556 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.07□□□□□ -1.92
SGCEO43556 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.07□□□□□ -1.92
SGCEO43556 CBX3P2-202ENST00000583365 535 ntBASIC3.07□□□□□ -1.92
SGCEO43556 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
SGCEO43556 AC018618.2-201ENST00000604770 446 ntBASIC3.07□□□□□ -1.92
SGCEO43556 AL451074.6-201ENST00000608512 729 ntBASIC3.07□□□□□ -1.92
SGCEO43556 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SGCEO43556 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SGCEO43556 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SGCEO43556 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SGCEO43556 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SGCEO43556 MFSD8-233ENST00000641482 4860 ntBASIC3.07□□□□□ -1.92
SGCEO43556 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SGCEO43556 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SGCEO43556 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SGCEO43556 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
SGCEO43556 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AL512646.1-201ENST00000269395 1077 ntBASIC3.06□□□□□ -1.92
SGCEO43556 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SGCEO43556 SNORA5A-201ENST00000384111 134 ntBASIC3.06□□□□□ -1.92
SGCEO43556 RNU6-1181P-201ENST00000384191 106 ntBASIC3.06□□□□□ -1.92
SGCEO43556 VTA1P1-201ENST00000414044 866 ntBASIC3.06□□□□□ -1.92
SGCEO43556 DBIP2-201ENST00000419076 262 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AL513174.1-201ENST00000423182 629 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.06□□□□□ -1.92
SGCEO43556 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.06□□□□□ -1.92
SGCEO43556 HMGN2P20-201ENST00000437531 273 ntBASIC3.06□□□□□ -1.92
SGCEO43556 MTND5P28-201ENST00000438005 1594 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.06□□□□□ -1.92
SGCEO43556 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SGCEO43556 AC073387.1-201ENST00000453261 709 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AC104308.1-201ENST00000454621 333 ntBASIC3.06□□□□□ -1.92
SGCEO43556 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.06□□□□□ -1.92
SGCEO43556 SYPL1P1-201ENST00000473622 768 ntBASIC3.06□□□□□ -1.92
SGCEO43556 RPS27AP1-201ENST00000475545 471 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AC012181.1-201ENST00000479895 423 ntBASIC3.06□□□□□ -1.92
SGCEO43556 MTCO3P35-201ENST00000485582 781 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AP000563.1-201ENST00000490865 758 ntBASIC3.06□□□□□ -1.92
SGCEO43556 FCF1P3-201ENST00000496394 590 ntBASIC3.06□□□□□ -1.92
SGCEO43556 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.06□□□□□ -1.92
SGCEO43556 AC104619.4-201ENST00000510773 249 ntBASIC3.06□□□□□ -1.92
SGCEO43556 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SGCEO43556 AC016065.2-201ENST00000514530 444 ntBASIC3.06□□□□□ -1.92
SGCEO43556 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
SGCEO43556 RNU6-1073P-201ENST00000517182 106 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AP001636.2-201ENST00000525517 696 ntBASIC3.06□□□□□ -1.92
SGCEO43556 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SGCEO43556 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.06□□□□□ -1.92
SGCEO43556 GTF2IP22-201ENST00000554443 182 ntBASIC3.06□□□□□ -1.92
SGCEO43556 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.06□□□□□ -1.92
SGCEO43556 AC012182.1-201ENST00000570133 895 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AC005951.1-201ENST00000576706 485 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AC090312.2-201ENST00000582687 378 ntBASIC3.06□□□□□ -1.92
SGCEO43556 MAGOH2P-202ENST00000584384 429 ntBASIC3.06□□□□□ -1.92
SGCEO43556 AC239803.2-201ENST00000610161 430 ntBASIC3.06□□□□□ -1.92
SGCEO43556 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms