Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.41□□□□□ -1.7
MSI1O43347 HMGB1P28-201ENST00000507778 552 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AC093281.2-201ENST00000510153 597 ntBASIC4.41□□□□□ -1.7
MSI1O43347 RNU6-678P-201ENST00000516832 109 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AF186190.1-201ENST00000517470 480 ntBASIC4.41□□□□□ -1.7
MSI1O43347 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.41□□□□□ -1.7
MSI1O43347 NDUFA5P2-201ENST00000519723 344 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.41□□□□□ -1.7
MSI1O43347 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.41□□□□□ -1.7
MSI1O43347 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.41□□□□□ -1.7
MSI1O43347 SLC2A13P1-201ENST00000531560 322 ntBASIC4.41□□□□□ -1.7
MSI1O43347 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.41□□□□□ -1.7
MSI1O43347 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.41□□□□□ -1.7
MSI1O43347 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.41□□□□□ -1.7
MSI1O43347 OR7K1P-201ENST00000546439 926 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AC069240.1-201ENST00000548774 375 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.41□□□□□ -1.7
MSI1O43347 AC007954.1-201ENST00000554198 494 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AC025884.1-201ENST00000556034 378 ntBASIC4.41□□□□□ -1.7
MSI1O43347 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.41□□□□□ -1.7
MSI1O43347 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.41□□□□□ -1.7
MSI1O43347 EIF5A2P1-201ENST00000564027 460 ntBASIC4.41□□□□□ -1.7
MSI1O43347 ACTR3BP3-201ENST00000565577 979 ntBASIC4.41□□□□□ -1.7
MSI1O43347 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.41□□□□□ -1.7
MSI1O43347 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
MSI1O43347 AL139395.1-201ENST00000603662 160 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.41□□□□□ -1.7
MSI1O43347 AC122108.2-201ENST00000611946 526 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AC073114.1-201ENST00000612027 490 ntBASIC4.41□□□□□ -1.7
MSI1O43347 FAM27D1-201ENST00000612308 341 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AL023881.1-201ENST00000621088 301 ntBASIC4.41□□□□□ -1.7
MSI1O43347 AC019278.1-201ENST00000623516 479 ntBASIC4.41□□□□□ -1.7
MSI1O43347 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
MSI1O43347 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MSI1O43347 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
MSI1O43347 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MSI1O43347 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MSI1O43347 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
MSI1O43347 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
MSI1O43347 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
MSI1O43347 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
MSI1O43347 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.41□□□□□ -1.7
MSI1O43347 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
MSI1O43347 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.4□□□□□ -1.7
MSI1O43347 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.4□□□□□ -1.7
MSI1O43347 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MSI1O43347 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
MSI1O43347 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
MSI1O43347 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MSI1O43347 RNU6-253P-201ENST00000384730 105 ntBASIC4.4□□□□□ -1.71
MSI1O43347 SNORD116-4-201ENST00000384733 96 ntBASIC4.4□□□□□ -1.71
MSI1O43347 CYCSP45-201ENST00000402289 315 ntBASIC4.4□□□□□ -1.71
MSI1O43347 MIR1284-201ENST00000408337 120 ntBASIC4.4□□□□□ -1.71
MSI1O43347 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MSI1O43347 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.4□□□□□ -1.71
MSI1O43347 AL590103.1-201ENST00000434488 307 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 AC241584.1-201ENST00000438469 1241 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AL360221.1-201ENST00000445989 335 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 AC009961.3-201ENST00000449832 765 ntBASIC4.4□□□□□ -1.71
MSI1O43347 OR6C5P-201ENST00000452388 923 ntBASIC4.4□□□□□ -1.71
MSI1O43347 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
MSI1O43347 RPL7P19-201ENST00000469948 618 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AC103987.1-201ENST00000473394 348 ntBASIC4.4□□□□□ -1.71
MSI1O43347 RN7SL41P-201ENST00000476144 297 ntBASIC4.4□□□□□ -1.71
MSI1O43347 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MSI1O43347 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 KCTD9P2-201ENST00000512203 1013 ntBASIC4.4□□□□□ -1.71
MSI1O43347 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.4□□□□□ -1.71
MSI1O43347 RNU6-488P-201ENST00000515918 99 ntBASIC4.4□□□□□ -1.71
MSI1O43347 RNA5SP73-201ENST00000516744 108 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 AP000790.1-201ENST00000528891 737 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AC007115.1-201ENST00000546853 234 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AL121766.1-201ENST00000547436 487 ntBASIC4.4□□□□□ -1.71
MSI1O43347 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 BNIP3P5-201ENST00000562290 498 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AL512347.1-201ENST00000566420 503 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AC012435.1-202ENST00000568772 240 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.4□□□□□ -1.71
MSI1O43347 AC008759.1-201ENST00000589783 983 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AF131215.7-201ENST00000602443 707 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AC069304.2-201ENST00000605154 435 ntBASIC4.4□□□□□ -1.71
MSI1O43347 AL031667.3-201ENST00000620124 655 ntBASIC4.4□□□□□ -1.71
MSI1O43347 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
MSI1O43347 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
MSI1O43347 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MSI1O43347 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MSI1O43347 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.4□□□□□ -1.71
MSI1O43347 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.4□□□□□ -1.71
MSI1O43347 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
MSI1O43347 AL390237.1-201ENST00000404226 1415 ntBASIC4.39□□□□□ -1.71
MSI1O43347 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MSI1O43347 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
MSI1O43347 AC025125.1-201ENST00000624743 1922 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms