Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DNAJC19P7-201ENST00000428811 344 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC188H7C350 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CCDC188H7C350 RPS29P31-201ENST00000446147 164 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
CCDC188H7C350 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CCDC188H7C350 AC091167.1-201ENST00000492017 396 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 AC093720.1-201ENST00000505681 714 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 MTCO1P30-201ENST00000515244 580 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 RN7SKP116-201ENST00000516902 319 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 IGKV2D-36-201ENST00000518643 226 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC188H7C350 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC188H7C350 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC188H7C350 MIR3912-201ENST00000577566 105 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC188H7C350 AL356218.2-201ENST00000605264 187 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 AL365400.2-201ENST00000605604 902 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 AC004825.2-201ENST00000616634 455 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 AC026634.1-201ENST00000634369 198 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 AF001550.2-201ENST00000636643 217 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC188H7C350 AC106754.1-201ENST00000562632 1513 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC188H7C350 AP005901.5-201ENST00000545779 1796 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC188H7C350 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC188H7C350 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC188H7C350 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC188H7C350 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC188H7C350 RNU6-263P-201ENST00000363811 107 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC188H7C350 KRR1P1-201ENST00000419430 803 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 MTND2P16-201ENST00000419987 799 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AC013410.2-201ENST00000422627 201 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AC091390.1-201ENST00000433904 331 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC188H7C350 USP9YP7-201ENST00000436723 430 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC188H7C350 AL031313.1-201ENST00000448435 256 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AC112492.1-201ENST00000449607 712 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC188H7C350 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC188H7C350 AC104073.1-201ENST00000451988 151 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 USP9YP32-201ENST00000452432 430 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC188H7C350 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC188H7C350 PNPLA4P1-201ENST00000458328 305 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 UQCRHP4-201ENST00000471686 272 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC188H7C350 TPT1P8-201ENST00000510120 555 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC188H7C350 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC188H7C350 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC188H7C350 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC188H7C350 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC188H7C350 AC107954.1-201ENST00000565906 727 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC188H7C350 VN1R83P-201ENST00000595685 445 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC188H7C350 AL035411.2-201ENST00000604022 421 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 IGHV3-29-201ENST00000604817 344 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AL157392.4-201ENST00000609756 345 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 RNVU1-4-201ENST00000612985 164 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AL354976.1-201ENST00000613843 387 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 AC090116.1-201ENST00000615679 446 ntBASIC3.98□□□□□ -1.77
CCDC188H7C350 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC188H7C350 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC188H7C350 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC188H7C350 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC188H7C350 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC188H7C350 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC188H7C350 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC188H7C350 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC188H7C350 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC188H7C350 NACA3P-201ENST00000359690 648 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 RNU4-51P-201ENST00000364206 140 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 MIR3074-201ENST00000384885 81 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 RNU2-42P-201ENST00000410697 113 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC188H7C350 CYP4F29P-201ENST00000420685 446 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 COX6CP17-201ENST00000421389 185 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 RPL23AP38-201ENST00000423801 469 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 USP9YP22-201ENST00000438971 294 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC188H7C350 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC188H7C350 AL136126.1-201ENST00000473603 402 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC108734.3-201ENST00000481241 1165 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 NCOR1P1-202ENST00000486162 291 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC188H7C350 OR4G11P-201ENST00000492842 939 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC188H7C350 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC188H7C350 AC113420.1-201ENST00000507903 571 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC026784.1-201ENST00000507986 352 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC113347.3-201ENST00000509113 148 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC188H7C350 NDUFA5P2-201ENST00000519723 344 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC188H7C350 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms