Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RN7SKP116-201ENST00000516902 319 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AL389895.1-201ENST00000554127 252 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC005476.1-201ENST00000554427 397 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AL845331.3-202ENST00000562856 261 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC037471.2-201ENST00000564941 598 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC034105.4-201ENST00000568304 277 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC106734.1-201ENST00000568646 663 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AP001180.3-201ENST00000582221 145 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 SUMO2P14-201ENST00000604488 293 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AL158050.2-201ENST00000605336 568 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AL121652.1-201ENST00000608851 448 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AP001033.2-201ENST00000609701 1003 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 uc_338.9-201ENST00000617424 182 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 SNORD39.4-201ENST00000620099 78 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AL138955.1-201ENST00000622881 1040 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 C2orf27A-204ENST00000623058 969 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 AC127502.3-201ENST00000636170 1206 ntBASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM49D1C9J1S8 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM49D1C9J1S8 ZNF826P-207ENST00000622273 1910 ntBASIC3.34□□□□□ -1.88
TRIM49D1C9J1S8 AC096656.1-201ENST00000623826 1364 ntBASIC3.34□□□□□ -1.88
TRIM49D1C9J1S8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM49D1C9J1S8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
TRIM49D1C9J1S8 HSPA8P19-201ENST00000505359 1517 ntBASIC3.34□□□□□ -1.88
TRIM49D1C9J1S8 CR383658.2-201ENST00000547576 1525 ntBASIC3.34□□□□□ -1.88
TRIM49D1C9J1S8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 MIR148B-201ENST00000362252 99 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 RNU2-17P-201ENST00000410290 190 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 CYCSP19-201ENST00000411715 316 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 CRYBB2P1-203ENST00000415709 538 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC012065.2-201ENST00000421295 375 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 CYCSP4-201ENST00000429682 331 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 B3GNT2P1-201ENST00000434960 952 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 CST9LP2-201ENST00000437612 320 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 FTH1P1-201ENST00000437933 532 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC115115.1-201ENST00000449927 248 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 RN7SL330P-201ENST00000469709 307 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC091959.2-201ENST00000477363 321 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC023050.1-201ENST00000498198 304 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 NDUFB4P9-201ENST00000511646 388 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 RNU5A-7P-201ENST00000515979 116 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 MIR1254-2-201ENST00000579553 63 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC015917.1-201ENST00000579654 510 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC067852.4-201ENST00000590314 478 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 BNIP3P40-201ENST00000596017 556 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 MTATP6P2-201ENST00000603319 678 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AL451086.1-201ENST00000605596 223 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC018816.2-201ENST00000621460 353 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 MFSD8-213ENST00000641134 1327 ntBASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRIM49D1C9J1S8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 U3.11-201ENST00000364476 212 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 MCTS2P-201ENST00000394552 546 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 RPL21P17-201ENST00000397467 475 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AL603865.2-201ENST00000401679 213 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 RN7SKP202-201ENST00000410439 330 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 RN7SKP159-201ENST00000410657 292 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 RN7SKP27-201ENST00000410684 333 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 HMGB3P23-201ENST00000414981 585 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 ATP5JP1-201ENST00000431631 322 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms