Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.39□□□□□ -1.87
SRRM4A7MD48 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
SRRM4A7MD48 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.39□□□□□ -1.87
SRRM4A7MD48 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SRRM4A7MD48 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.39□□□□□ -1.87
SRRM4A7MD48 AC025588.2-201ENST00000604851 466 ntBASIC3.39□□□□□ -1.87
SRRM4A7MD48 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRRM4A7MD48 AL121873.1-201ENST00000616013 524 ntBASIC3.39□□□□□ -1.87
SRRM4A7MD48 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.39□□□□□ -1.87
SRRM4A7MD48 AP000484.1-201ENST00000620067 1252 ntBASIC3.39□□□□□ -1.87
SRRM4A7MD48 U6.101-201ENST00000637707 76 ntBASIC3.39□□□□□ -1.87
SRRM4A7MD48 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.39□□□□□ -1.87
SRRM4A7MD48 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SRRM4A7MD48 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SRRM4A7MD48 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRRM4A7MD48 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRRM4A7MD48 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SRRM4A7MD48 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRRM4A7MD48 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRRM4A7MD48 ZNF962P-201ENST00000443465 3140 ntBASIC3.39□□□□□ -1.87
SRRM4A7MD48 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRRM4A7MD48 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC139713.2-214ENST00000642059 1811 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 RNA5SP189-201ENST00000364920 115 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 ARF4P3-201ENST00000397387 509 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 COX7BP2-201ENST00000437976 242 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 ELOCP13-201ENST00000443934 329 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 NDUFA12P1-201ENST00000455914 406 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 SUMO2P2-201ENST00000456482 255 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 RPS29P33-201ENST00000456717 146 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 RPS15AP17-201ENST00000470598 390 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 RPL7P18-201ENST00000478965 734 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC006517.1-201ENST00000480485 328 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 FAM172BP-201ENST00000487497 1089 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC007686.1-201ENST00000488511 463 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC013356.1-201ENST00000489027 564 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC108941.1-201ENST00000502853 530 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC021146.5-201ENST00000503544 545 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC025554.1-201ENST00000505641 188 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC017037.1-201ENST00000508460 471 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC005921.1-201ENST00000510589 286 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 RNA5SP519-201ENST00000516480 119 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 RNU5A-4P-201ENST00000516588 111 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 MTND2P38-201ENST00000522536 667 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC063950.1-201ENST00000552036 308 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 SNORD84-203ENST00000584275 78 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC061975.8-201ENST00000587058 721 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC010928.3-201ENST00000587712 541 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC234772.3-201ENST00000602277 528 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC104785.1-201ENST00000603220 588 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC103881.1-201ENST00000603476 538 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AL592221.1-201ENST00000605266 382 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC012603.1-201ENST00000606424 528 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC009159.2-201ENST00000617603 606 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC006386.1-201ENST00000619436 415 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AP000346.3-201ENST00000622821 210 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC006963.1-201ENST00000624003 1052 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC067931.1-201ENST00000624190 671 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC138649.5-201ENST00000637456 137 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 AC027287.1-201ENST00000553115 1453 ntBASIC3.38□□□□□ -1.87
SRRM4A7MD48 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SRRM4A7MD48 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SRRM4A7MD48 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SRRM4A7MD48 AL365440.1-201ENST00000436135 2167 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms