Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 AC068790.2-201ENST00000602601 557 ntBASIC5□□□□□ -1.61
CPA4Q9UI42 AC073114.1-201ENST00000612027 490 ntBASIC5□□□□□ -1.61
CPA4Q9UI42 AC018816.2-201ENST00000621460 353 ntBASIC5□□□□□ -1.61
CPA4Q9UI42 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5□□□□□ -1.61
CPA4Q9UI42 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CPA4Q9UI42 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CPA4Q9UI42 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5□□□□□ -1.61
CPA4Q9UI42 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5□□□□□ -1.61
CPA4Q9UI42 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CPA4Q9UI42 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
CPA4Q9UI42 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 OR5BR1P-201ENST00000524992 1330 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 MTND5P24-201ENST00000438892 1767 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 RNU6-1293P-201ENST00000384077 107 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 RNA5SP187-201ENST00000384400 119 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 SNORD116-4-201ENST00000384733 96 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC073264.1-201ENST00000411508 416 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC007738.1-201ENST00000413892 348 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 AL353597.2-202ENST00000434901 373 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 RPS26P56-201ENST00000444468 240 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC104651.2-201ENST00000447549 528 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 MTCO1P48-201ENST00000448024 1096 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC072039.1-201ENST00000477611 581 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 OR4A12P-201ENST00000530847 918 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC090502.2-201ENST00000549267 280 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 MIR3944-201ENST00000581277 108 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 AL359535.1-201ENST00000612100 1087 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 RNU6-156P-201ENST00000621869 107 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC008443.7-201ENST00000622195 246 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 AC117529.2-201ENST00000512159 2068 ntBASIC4.99□□□□□ -1.61
CPA4Q9UI42 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.99□□□□□ -1.61
CPA4Q9UI42 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CPA4Q9UI42 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CPA4Q9UI42 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CPA4Q9UI42 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CPA4Q9UI42 RNU4-44P-201ENST00000363050 141 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 Y_RNA.302-201ENST00000364997 102 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 RNU6-441P-201ENST00000384545 106 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 MT-TH-201ENST00000387441 69 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 VDAC2P1-201ENST00000399358 958 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC097374.1-203ENST00000400783 485 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 RNU2-28P-201ENST00000410457 189 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 CRYBB2P1-203ENST00000415709 538 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC108032.1-201ENST00000416706 207 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 RPS3AP9-201ENST00000417027 792 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC073335.1-201ENST00000427776 363 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 AL136231.1-201ENST00000429407 730 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC018644.1-201ENST00000429934 551 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 AL360221.1-201ENST00000445989 335 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC021660.1-201ENST00000465006 554 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 RPL35AP15-201ENST00000468042 339 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 RPL23AP2-201ENST00000471227 466 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CPA4Q9UI42 MTCYBP37-201ENST00000510642 1133 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC099522.1-202ENST00000514718 367 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 RNA5SP249-201ENST00000516127 99 ntBASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.98□□□□□ -1.61
CPA4Q9UI42 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms