Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RIMBP3Q9UFD9 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RIMBP3Q9UFD9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.65□□□□□ -1.67
RIMBP3Q9UFD9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RIMBP3Q9UFD9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
RIMBP3Q9UFD9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
RIMBP3Q9UFD9 Y_RNA.355-201ENST00000365462 98 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 RNA5SP104-201ENST00000410989 118 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC107081.1-201ENST00000414975 361 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 OR5H5P-201ENST00000503164 928 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC025034.2-201ENST00000623264 286 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC079298.2-201ENST00000623885 459 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC026634.1-201ENST00000634369 198 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AL121834.1-202ENST00000404494 277 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 Y_RNA.595-201ENST00000410403 105 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC002075.2-201ENST00000425207 252 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC099560.2-201ENST00000457554 255 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AC091179.1-201ENST00000461606 579 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 SNORA70.19-201ENST00000516717 90 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 MYL12AP1-201ENST00000518490 515 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AP000859.1-201ENST00000525536 307 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AP000867.2-201ENST00000532468 320 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 CTSLP2-204ENST00000629029 392 ntBASIC4.64□□□□□ -1.67
RIMBP3Q9UFD9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 HMGN2P8-201ENST00000391458 268 ntBASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 AL137014.1-201ENST00000420490 1226 ntBASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 SCARNA20.6-201ENST00000517251 106 ntBASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 AC015813.4-201ENST00000610469 179 ntBASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RIMBP3Q9UFD9 NSRP1P1-201ENST00000444067 1693 ntBASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 AL513043.1-201ENST00000439124 535 ntBASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 Z99127.3-201ENST00000448158 395 ntBASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 FCF1P3-201ENST00000496394 590 ntBASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 HNRNPKP5-201ENST00000515300 253 ntBASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 AP000942.3-201ENST00000603702 160 ntBASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RIMBP3Q9UFD9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 SNORD114-1-201ENST00000362705 72 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 AC017078.1-201ENST00000416146 368 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 FAM103A2P-201ENST00000444122 354 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 AC006445.2-201ENST00000510061 472 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 MIR4498-201ENST00000577599 66 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 AC139713.2-215ENST00000641428 5037 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 SETP15-201ENST00000412724 337 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 AC245517.4-201ENST00000448601 281 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 MRPS31P2-201ENST00000451581 518 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 AC008565.1-201ENST00000509046 885 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 SNORA31.21-201ENST00000517180 77 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 AC078814.3-201ENST00000553036 491 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 uc_338.32-201ENST00000615087 172 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 AC006840.1-201ENST00000623069 542 ntBASIC4.61□□□□□ -1.67
RIMBP3Q9UFD9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 KPNA2P2-201ENST00000419546 1489 ntBASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 AL138827.1-201ENST00000402666 306 ntBASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 AC048351.1-201ENST00000420064 602 ntBASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 YWHAEP5-201ENST00000431545 765 ntBASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RIMBP3Q9UFD9 AC018555.1-201ENST00000567548 1980 ntBASIC4.59□□□□□ -1.67
RIMBP3Q9UFD9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms