Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC010342.1-201ENST00000514047 877 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 RNU5A-7P-201ENST00000515979 116 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 SERPINE4P-201ENST00000554978 281 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC018754.1-201ENST00000607486 925 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 U3.45-201ENST00000607547 219 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC093875.1-201ENST00000623688 504 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AL109659.3-201ENST00000624985 950 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AP000720.1-201ENST00000625091 483 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
HPS4Q9NQG7 MTND4P8-201ENST00000514997 1362 ntBASIC3.9□□□□□ -1.78
HPS4Q9NQG7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HPS4Q9NQG7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
HPS4Q9NQG7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 SNORA9-201ENST00000384215 133 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 RNU6-77P-201ENST00000410554 91 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 RPL21P110-201ENST00000433345 446 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 RPS17P13-201ENST00000448974 407 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AL049829.1-201ENST00000465411 156 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 PLGLA-201ENST00000465668 449 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AC015908.1-201ENST00000478739 476 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 RN7SL293P-201ENST00000481765 281 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 PTGES3P3-201ENST00000511479 482 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 PRELID3BP4-201ENST00000515476 571 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 RNA5SP164-201ENST00000516533 110 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AC074029.1-201ENST00000552531 1044 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 MIR4789-201ENST00000577469 82 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AC096577.2-201ENST00000611455 153 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AC006249.1-201ENST00000621223 471 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 AP000943.4-201ENST00000622912 357 ntBASIC3.9□□□□□ -1.79
HPS4Q9NQG7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HPS4Q9NQG7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 MIR34B-201ENST00000385076 84 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 RNU6-932P-201ENST00000391108 106 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 RPL17P50-201ENST00000396131 546 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AL138878.1-201ENST00000405131 347 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 RNU6-272P-201ENST00000411028 104 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AP000907.1-201ENST00000428428 510 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 VN1R25P-201ENST00000443385 738 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 VN1R40P-201ENST00000455196 941 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 snoU13.7-201ENST00000459220 104 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 RPL21P18-201ENST00000469899 480 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 RPS27P23-201ENST00000487608 251 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 RN7SKP18-201ENST00000516005 275 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AP003355.1-201ENST00000518956 587 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 HMGB1P1-201ENST00000522557 636 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 MTND2P26-201ENST00000528255 1029 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AC124293.1-201ENST00000530034 493 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms