Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC018555.1-201ENST00000567548 1980 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 MARK2P15-201ENST00000432204 2186 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC116667.1-201ENST00000604855 2072 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 SPRR2C-201ENST00000290702 219 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 OR4A15-201ENST00000314706 1035 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC007685.1-201ENST00000329806 452 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 RNU11-4P-201ENST00000391149 133 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 PPIAP31-201ENST00000405422 495 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 RPL23AP47-201ENST00000408017 460 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 MIR1193-201ENST00000408109 78 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 RNU4-22P-201ENST00000411058 166 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 MTATP6P20-201ENST00000414147 562 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC092634.6-201ENST00000418558 192 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 RPS3AP37-201ENST00000419176 745 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 KRR1P1-201ENST00000419430 803 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 MTND2P16-201ENST00000419987 799 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC007435.1-201ENST00000421086 415 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC241584.1-201ENST00000438469 1241 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 EEF1A1P39-201ENST00000440791 250 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AL589880.1-201ENST00000448271 287 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 HMGB3P22-202ENST00000451823 572 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC010307.1-201ENST00000467206 836 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AL132838.2-201ENST00000492041 314 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 TRAV31-201ENST00000502780 342 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 MTCO1P30-201ENST00000515244 580 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 RNU2-58P-201ENST00000516403 183 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 ARL2BPP5-201ENST00000523141 481 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AP004242.1-201ENST00000533701 349 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC092470.1-201ENST00000546187 132 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 GTF2IP8-201ENST00000560687 584 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC021749.1-201ENST00000604322 607 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 RNU4-89P-201ENST00000607443 133 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 uc_338.32-201ENST00000615087 172 ntBASIC3.76□□□□□ -1.81
UBQLN3Q9H347 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.76□□□□□ -1.81
UBQLN3Q9H347 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC027287.1-201ENST00000553115 1453 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 OR11H4-201ENST00000315409 1082 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 RNU6-251P-201ENST00000363235 104 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 RNU4-68P-201ENST00000364314 141 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 SNORA57.1-201ENST00000391227 145 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AL023807.1-201ENST00000407932 359 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 PGBD4P8-201ENST00000412993 562 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 TPT1P2-201ENST00000413105 503 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 USP9YP24-201ENST00000434374 697 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 NANOGP2-201ENST00000435391 727 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AL138799.3-201ENST00000438968 350 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 USP9YP22-201ENST00000438971 294 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 USP9YP17-201ENST00000444617 696 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AL606517.1-201ENST00000446914 387 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 ZNF886P-201ENST00000450781 723 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC005410.1-202ENST00000460347 485 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 FTH1P2-201ENST00000466086 412 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 RPL23AP44-201ENST00000482216 473 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 NCOR1P1-202ENST00000486162 291 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC078918.1-201ENST00000498515 228 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC093824.1-201ENST00000508796 343 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC108064.1-201ENST00000513791 460 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.75□□□□□ -1.81
UBQLN3Q9H347 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms