Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC090574.1-201ENST00000623186 233 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AC126323.6-202ENST00000568092 3511 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VPS11Q9H270 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS11Q9H270 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS11Q9H270 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS11Q9H270 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS11Q9H270 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS11Q9H270 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VPS11Q9H270 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS11Q9H270 AC109315.1-201ENST00000584143 1347 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
VPS11Q9H270 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS11Q9H270 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS11Q9H270 Y_RNA.89-201ENST00000363031 102 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 RNU6-251P-201ENST00000363235 104 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 RN7SKP15-201ENST00000364742 309 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 Y_RNA.279-201ENST00000364763 95 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 Y_RNA.302-201ENST00000364997 102 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 SNORA2.3-201ENST00000383920 135 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 CYCSP45-201ENST00000402289 315 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS11Q9H270 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
VPS11Q9H270 AL136133.1-201ENST00000413694 376 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 SKP1P3-201ENST00000429280 487 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS11Q9H270 HMGB3P9-201ENST00000441799 583 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 AC244505.5-201ENST00000443639 207 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS11Q9H270 IFNWP4-201ENST00000453148 294 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 SIAH1P1-201ENST00000479411 923 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 RPS4XP15-201ENST00000489210 795 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 RN7SL547P-201ENST00000490793 290 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS11Q9H270 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS11Q9H270 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS11Q9H270 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS11Q9H270 AC022404.1-201ENST00000555320 273 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 PSMA3P-201ENST00000555485 635 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 PSMB7P1-201ENST00000556349 514 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS11Q9H270 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS11Q9H270 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS11Q9H270 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS11Q9H270 AC104695.2-201ENST00000605056 775 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 AC005332.6-201ENST00000613178 446 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 AC040896.1-201ENST00000613819 479 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 AC131238.1-201ENST00000617135 328 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 AC079684.1-201ENST00000621405 437 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 AC073348.1-201ENST00000623002 331 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
VPS11Q9H270 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS11Q9H270 MKKS-204ENST00000639674 192 ntBASIC5.08□□□□□ -1.6
VPS11Q9H270 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS11Q9H270 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS11Q9H270 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS11Q9H270 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS11Q9H270 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS11Q9H270 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS11Q9H270 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS11Q9H270 CR383658.2-201ENST00000547576 1525 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS11Q9H270 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
VPS11Q9H270 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS11Q9H270 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS11Q9H270 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS11Q9H270 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS11Q9H270 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS11Q9H270 RNU6-621P-201ENST00000364752 109 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 Y_RNA.402-201ENST00000383972 102 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 Y_RNA.548-201ENST00000384656 105 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 RPL23AP47-201ENST00000408017 460 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 RNU2-21P-201ENST00000410368 188 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC092634.6-201ENST00000418558 192 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS11Q9H270 EI24P4-201ENST00000423683 1078 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS11Q9H270 RPL31P15-201ENST00000449770 338 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS11Q9H270 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS11Q9H270 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
VPS11Q9H270 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS11Q9H270 HMGB1P21-201ENST00000502313 581 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS11Q9H270 AC018710.1-201ENST00000506509 158 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC111000.3-201ENST00000508057 576 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS11Q9H270 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.07□□□□□ -1.6
VPS11Q9H270 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.07□□□□□ -1.6
VPS11Q9H270 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS11Q9H270 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS11Q9H270 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS11Q9H270 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS11Q9H270 OR4A12P-201ENST00000530847 918 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC005868.1-201ENST00000536421 331 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
VPS11Q9H270 AC126177.5-201ENST00000549599 178 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms