Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CR383658.2-201ENST00000547576 1525 ntBASIC5.01□□□□□ -1.61
HPS3Q969F9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HPS3Q969F9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.01□□□□□ -1.61
HPS3Q969F9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HPS3Q969F9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HPS3Q969F9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
HPS3Q969F9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HPS3Q969F9 NXPH1-205ENST00000602349 1953 ntBASIC5□□□□□ -1.61
HPS3Q969F9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 AP002907.1-201ENST00000606361 1430 ntBASIC5□□□□□ -1.61
HPS3Q969F9 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HPS3Q969F9 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 AC139713.2-215ENST00000641428 5037 ntBASIC5□□□□□ -1.61
HPS3Q969F9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HPS3Q969F9 AC139769.1-204ENST00000472297 1931 ntBASIC5□□□□□ -1.61
HPS3Q969F9 RNU6-623P-201ENST00000363143 105 ntBASIC5□□□□□ -1.61
HPS3Q969F9 RNU4-24P-201ENST00000364565 139 ntBASIC5□□□□□ -1.61
HPS3Q969F9 SNORA71.2-201ENST00000364941 134 ntBASIC5□□□□□ -1.61
HPS3Q969F9 RNA5SP397-201ENST00000391323 118 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC016769.3-201ENST00000396562 315 ntBASIC5□□□□□ -1.61
HPS3Q969F9 ARF4P3-201ENST00000397387 509 ntBASIC5□□□□□ -1.61
HPS3Q969F9 SNRPFP1-201ENST00000414761 252 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC004690.1-201ENST00000418216 328 ntBASIC5□□□□□ -1.61
HPS3Q969F9 RPEP3-201ENST00000425462 676 ntBASIC5□□□□□ -1.61
HPS3Q969F9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5□□□□□ -1.61
HPS3Q969F9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5□□□□□ -1.61
HPS3Q969F9 OR4F13P-201ENST00000428478 931 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5□□□□□ -1.61
HPS3Q969F9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5□□□□□ -1.61
HPS3Q969F9 AC010153.1-201ENST00000432862 727 ntBASIC5□□□□□ -1.61
HPS3Q969F9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 AL357520.1-201ENST00000441557 453 ntBASIC5□□□□□ -1.61
HPS3Q969F9 RPL23AP43-201ENST00000446445 471 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC073264.2-201ENST00000448886 166 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC104073.1-201ENST00000451988 151 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5□□□□□ -1.61
HPS3Q969F9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5□□□□□ -1.61
HPS3Q969F9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5□□□□□ -1.61
HPS3Q969F9 DEFB109F-201ENST00000491870 277 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC008897.1-201ENST00000494006 347 ntBASIC5□□□□□ -1.61
HPS3Q969F9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5□□□□□ -1.61
HPS3Q969F9 AC104986.1-201ENST00000517978 436 ntBASIC5□□□□□ -1.61
HPS3Q969F9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5□□□□□ -1.61
HPS3Q969F9 HSPA8P13-201ENST00000523715 472 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AP006289.1-201ENST00000538089 277 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC092470.1-201ENST00000546187 132 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5□□□□□ -1.61
HPS3Q969F9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5□□□□□ -1.61
HPS3Q969F9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5□□□□□ -1.61
HPS3Q969F9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 AP001004.1-201ENST00000582468 324 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC008507.1-201ENST00000587506 734 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AP001981.2-201ENST00000603241 418 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AC007566.2-201ENST00000603642 413 ntBASIC5□□□□□ -1.61
HPS3Q969F9 AL160290.3-201ENST00000604869 165 ntBASIC5□□□□□ -1.61
HPS3Q969F9 RN7SKP299-201ENST00000606679 301 ntBASIC5□□□□□ -1.61
HPS3Q969F9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 CPHL1P-201ENST00000461341 3407 ntBASIC5□□□□□ -1.61
HPS3Q969F9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5□□□□□ -1.61
HPS3Q969F9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5□□□□□ -1.61
HPS3Q969F9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HPS3Q969F9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HPS3Q969F9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HPS3Q969F9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5□□□□□ -1.61
HPS3Q969F9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5□□□□□ -1.61
HPS3Q969F9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HPS3Q969F9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HPS3Q969F9 AL390237.1-201ENST00000404226 1415 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.99□□□□□ -1.61
HPS3Q969F9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HPS3Q969F9 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
HPS3Q969F9 RNU6-501P-201ENST00000364072 100 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 SNORD113.2-201ENST00000364166 89 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 RNA5SP505-201ENST00000364748 108 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AL355379.1-201ENST00000405542 640 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 VDAC1P9-201ENST00000412766 841 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.99□□□□□ -1.61
HPS3Q969F9 AC092647.1-201ENST00000420654 287 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 RPEP2-201ENST00000432149 701 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AL359265.2-201ENST00000434367 631 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AC011753.3-201ENST00000443436 406 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 COX6CP2-201ENST00000444980 225 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 EEF1E1P1-201ENST00000446998 430 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 IFNWP4-201ENST00000453148 294 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.99□□□□□ -1.61
HPS3Q969F9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 RPL23AP72-201ENST00000492447 435 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.99□□□□□ -1.61
HPS3Q969F9 AC108941.1-201ENST00000502853 530 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 TMEM251P1-201ENST00000503717 318 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 MTND4P2-201ENST00000507767 1203 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.99□□□□□ -1.61
HPS3Q969F9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms