Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 AC120193.1-204ENST00000519689 651 ntTSL 4 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 AL021808.1-201ENST00000604325 1117 ntBASIC5.56□□□□□ -1.52
LINC01559Q495D7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 AC073869.8-201ENST00000641806 335 ntBASIC5.56□□□□□ -1.52
LINC01559Q495D7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 MAPK10-261ENST00000641050 3109 ntBASIC5.56□□□□□ -1.52
LINC01559Q495D7 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
LINC01559Q495D7 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC01559Q495D7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 RN7SKP174-201ENST00000363803 330 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 Y_RNA.418-201ENST00000384029 102 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 RNU6-76P-201ENST00000384060 104 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 RNU1-74P-201ENST00000384108 171 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC131097.2-201ENST00000404031 595 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 RNU2-50P-201ENST00000410494 143 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC004986.1-201ENST00000414855 607 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 CYCSP10-201ENST00000417973 294 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC005002.2-201ENST00000438228 269 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 CLUHP5-201ENST00000438421 774 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 TSSK1A-201ENST00000450724 768 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC087588.1-201ENST00000462203 316 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 RN7SL241P-201ENST00000482973 236 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 RN7SL184P-201ENST00000488308 297 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AL445187.1-201ENST00000502685 260 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 RNU6-1219P-201ENST00000516143 112 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 Y_RNA.679-201ENST00000516416 91 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 RNA5SP460-201ENST00000516789 100 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 PGAM1P8-201ENST00000526979 453 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 H3F3AP1-201ENST00000559984 334 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 RN7SL178P-201ENST00000582930 304 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC011476.5-201ENST00000615594 130 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 AL121985.2-201ENST00000621192 555 ntBASIC5.55□□□□□ -1.52
LINC01559Q495D7 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC01559Q495D7 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LINC01559Q495D7 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LINC01559Q495D7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LINC01559Q495D7 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LINC01559Q495D7 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms