Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.48□□□□□ -1.85
RORAP35398 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.48□□□□□ -1.85
RORAP35398 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.48□□□□□ -1.85
RORAP35398 PTP4A1P3-201ENST00000433661 420 ntBASIC3.48□□□□□ -1.85
RORAP35398 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.48□□□□□ -1.85
RORAP35398 HMGB3P8-201ENST00000449709 577 ntBASIC3.48□□□□□ -1.85
RORAP35398 RPL21P104-201ENST00000464143 478 ntBASIC3.48□□□□□ -1.85
RORAP35398 RPL7P49-201ENST00000471402 708 ntBASIC3.48□□□□□ -1.85
RORAP35398 NPM1P17-201ENST00000479221 602 ntBASIC3.48□□□□□ -1.85
RORAP35398 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.48□□□□□ -1.85
RORAP35398 AL035404.1-201ENST00000497982 568 ntBASIC3.48□□□□□ -1.85
RORAP35398 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.48□□□□□ -1.85
RORAP35398 SETP12-201ENST00000514068 805 ntBASIC3.48□□□□□ -1.85
RORAP35398 AC008494.2-201ENST00000514544 370 ntBASIC3.48□□□□□ -1.85
RORAP35398 AC092747.2-201ENST00000545069 983 ntBASIC3.48□□□□□ -1.85
RORAP35398 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.48□□□□□ -1.85
RORAP35398 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.48□□□□□ -1.85
RORAP35398 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RORAP35398 NTAN1P1-201ENST00000603150 646 ntBASIC3.48□□□□□ -1.85
RORAP35398 KATNBL1P5-201ENST00000605015 517 ntBASIC3.48□□□□□ -1.85
RORAP35398 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RORAP35398 HMGN2P28-201ENST00000606102 262 ntBASIC3.48□□□□□ -1.85
RORAP35398 AP001033.2-201ENST00000609701 1003 ntBASIC3.48□□□□□ -1.85
RORAP35398 AC006023.2-201ENST00000609916 167 ntBASIC3.48□□□□□ -1.85
RORAP35398 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
RORAP35398 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.48□□□□□ -1.85
RORAP35398 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RORAP35398 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
RORAP35398 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.48□□□□□ -1.85
RORAP35398 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RORAP35398 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.48□□□□□ -1.85
RORAP35398 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RORAP35398 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RORAP35398 MTND5P11-201ENST00000511037 1812 ntBASIC3.47□□□□□ -1.85
RORAP35398 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RORAP35398 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RORAP35398 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
RORAP35398 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RORAP35398 SNORD9-201ENST00000362566 104 ntBASIC3.47□□□□□ -1.85
RORAP35398 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RORAP35398 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RORAP35398 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RORAP35398 MIR591-201ENST00000385290 95 ntBASIC3.47□□□□□ -1.85
RORAP35398 BTBD10P2-201ENST00000404779 676 ntBASIC3.47□□□□□ -1.85
RORAP35398 AC069218.2-201ENST00000411665 344 ntBASIC3.47□□□□□ -1.85
RORAP35398 AC005189.1-201ENST00000431286 310 ntBASIC3.47□□□□□ -1.85
RORAP35398 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.47□□□□□ -1.85
RORAP35398 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.47□□□□□ -1.85
RORAP35398 MTCYBP31-201ENST00000438855 1122 ntBASIC3.47□□□□□ -1.85
RORAP35398 AL662791.1-201ENST00000441992 928 ntBASIC3.47□□□□□ -1.85
RORAP35398 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.47□□□□□ -1.85
RORAP35398 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.47□□□□□ -1.85
RORAP35398 RPL21P23-201ENST00000446654 460 ntBASIC3.47□□□□□ -1.85
RORAP35398 PRDX3P3-201ENST00000447765 522 ntBASIC3.47□□□□□ -1.85
RORAP35398 SLC31A1P1-201ENST00000451221 567 ntBASIC3.47□□□□□ -1.85
RORAP35398 PRSS3P4-201ENST00000453323 162 ntBASIC3.47□□□□□ -1.85
RORAP35398 RN7SL293P-201ENST00000481765 281 ntBASIC3.47□□□□□ -1.85
RORAP35398 AC133963.2-201ENST00000513686 578 ntBASIC3.47□□□□□ -1.85
RORAP35398 RN7SKP13-201ENST00000515933 244 ntBASIC3.47□□□□□ -1.85
RORAP35398 AC104115.2-201ENST00000523026 687 ntBASIC3.47□□□□□ -1.85
RORAP35398 MTND2P26-201ENST00000528255 1029 ntBASIC3.47□□□□□ -1.85
RORAP35398 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.47□□□□□ -1.85
RORAP35398 OR5B10P-201ENST00000532869 642 ntBASIC3.47□□□□□ -1.85
RORAP35398 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.47□□□□□ -1.85
RORAP35398 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.47□□□□□ -1.85
RORAP35398 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.47□□□□□ -1.85
RORAP35398 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.47□□□□□ -1.85
RORAP35398 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.47□□□□□ -1.85
RORAP35398 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.47□□□□□ -1.85
RORAP35398 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.47□□□□□ -1.85
RORAP35398 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.47□□□□□ -1.85
RORAP35398 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
RORAP35398 U73479.1-201ENST00000618062 168 ntBASIC3.47□□□□□ -1.85
RORAP35398 AC243312.2-201ENST00000623340 601 ntBASIC3.47□□□□□ -1.85
RORAP35398 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.47□□□□□ -1.85
RORAP35398 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.47□□□□□ -1.85
RORAP35398 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.47□□□□□ -1.85
RORAP35398 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
RORAP35398 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.47□□□□□ -1.85
RORAP35398 AC007823.1-201ENST00000569932 1566 ntBASIC3.46□□□□□ -1.85
RORAP35398 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
RORAP35398 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
RORAP35398 XPOTP1-201ENST00000443317 2398 ntBASIC3.46□□□□□ -1.86
RORAP35398 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RORAP35398 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RORAP35398 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.46□□□□□ -1.86
RORAP35398 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RORAP35398 RNA5SP387-201ENST00000364226 106 ntBASIC3.46□□□□□ -1.86
RORAP35398 MIR218-2-201ENST00000385006 110 ntBASIC3.46□□□□□ -1.86
RORAP35398 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.46□□□□□ -1.86
RORAP35398 MIR1250-201ENST00000408098 113 ntBASIC3.46□□□□□ -1.86
RORAP35398 UBE2V1P11-201ENST00000411559 285 ntBASIC3.46□□□□□ -1.86
RORAP35398 AC245052.5-201ENST00000416320 649 ntBASIC3.46□□□□□ -1.86
RORAP35398 AC245054.1-201ENST00000420944 258 ntBASIC3.46□□□□□ -1.86
RORAP35398 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.46□□□□□ -1.86
RORAP35398 AP000907.1-201ENST00000428428 510 ntBASIC3.46□□□□□ -1.86
RORAP35398 AC073508.1-201ENST00000428866 656 ntBASIC3.46□□□□□ -1.86
RORAP35398 AC092641.1-201ENST00000440229 772 ntBASIC3.46□□□□□ -1.86
RORAP35398 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.46□□□□□ -1.86
RORAP35398 RNFT1P2-201ENST00000443064 757 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms