Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC009229.4-201ENST00000623854 1947 ntBASIC6.06□□□□□ -1.44
LIG1P18858 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.06□□□□□ -1.44
LIG1P18858 RNU1-19P-201ENST00000363306 165 ntBASIC6.06□□□□□ -1.44
LIG1P18858 RN7SKP162-201ENST00000363605 345 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AC019155.1-201ENST00000382242 574 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AC005522.1-201ENST00000395416 346 ntBASIC6.06□□□□□ -1.44
LIG1P18858 OR4K12P-201ENST00000406538 961 ntBASIC6.06□□□□□ -1.44
LIG1P18858 EIF4A1P3-201ENST00000411521 244 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AL589872.1-201ENST00000426602 288 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AC023347.2-201ENST00000433994 462 ntBASIC6.06□□□□□ -1.44
LIG1P18858 RPL17P49-201ENST00000443728 411 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.06□□□□□ -1.44
LIG1P18858 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.06□□□□□ -1.44
LIG1P18858 AP000942.1-201ENST00000463969 747 ntBASIC6.06□□□□□ -1.44
LIG1P18858 PPIAP21-201ENST00000464473 501 ntBASIC6.06□□□□□ -1.44
LIG1P18858 RPS26P39-201ENST00000469206 341 ntBASIC6.06□□□□□ -1.44
LIG1P18858 RPL21P6-201ENST00000479171 504 ntBASIC6.06□□□□□ -1.44
LIG1P18858 UBA52P3-201ENST00000491303 382 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LIG1P18858 AC139783.2-201ENST00000504847 1145 ntBASIC6.06□□□□□ -1.44
LIG1P18858 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.06□□□□□ -1.44
LIG1P18858 RNU6-1003P-201ENST00000517099 105 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.06□□□□□ -1.44
LIG1P18858 AC008562.1-201ENST00000521763 330 ntBASIC6.06□□□□□ -1.44
LIG1P18858 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LIG1P18858 AP003072.1-201ENST00000531740 145 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.06□□□□□ -1.44
LIG1P18858 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.06□□□□□ -1.44
LIG1P18858 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.06□□□□□ -1.44
LIG1P18858 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC6.06□□□□□ -1.44
LIG1P18858 AC018552.3-201ENST00000567416 561 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AC233702.9-201ENST00000581528 203 ntBASIC6.06□□□□□ -1.44
LIG1P18858 MIR4472-2-201ENST00000582069 67 ntBASIC6.06□□□□□ -1.44
LIG1P18858 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.06□□□□□ -1.44
LIG1P18858 VN1R80P-201ENST00000597126 338 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AL136363.1-201ENST00000605349 337 ntBASIC6.06□□□□□ -1.44
LIG1P18858 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.06□□□□□ -1.44
LIG1P18858 AL158801.5-201ENST00000623123 465 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AP006248.2-201ENST00000623309 592 ntBASIC6.06□□□□□ -1.44
LIG1P18858 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.06□□□□□ -1.44
LIG1P18858 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIG1P18858 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
LIG1P18858 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LIG1P18858 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
LIG1P18858 AL451142.2-201ENST00000429076 2090 ntBASIC6.06□□□□□ -1.44
LIG1P18858 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIG1P18858 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIG1P18858 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.05□□□□□ -1.44
LIG1P18858 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LIG1P18858 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
LIG1P18858 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIG1P18858 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIG1P18858 Y_RNA.166-201ENST00000363730 102 ntBASIC6.05□□□□□ -1.44
LIG1P18858 SNORA51.2-201ENST00000364595 132 ntBASIC6.05□□□□□ -1.44
LIG1P18858 RNU1-149P-201ENST00000390870 161 ntBASIC6.05□□□□□ -1.44
LIG1P18858 AL121972.1-201ENST00000402023 252 ntBASIC6.05□□□□□ -1.44
LIG1P18858 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LIG1P18858 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.05□□□□□ -1.44
LIG1P18858 RNU2-6P-201ENST00000411404 190 ntBASIC6.05□□□□□ -1.44
LIG1P18858 RPL7P57-201ENST00000423238 740 ntBASIC6.05□□□□□ -1.44
LIG1P18858 EIF1P3-201ENST00000423841 334 ntBASIC6.05□□□□□ -1.44
LIG1P18858 SRSF1P1-201ENST00000424058 520 ntBASIC6.05□□□□□ -1.44
LIG1P18858 RPL31P35-201ENST00000431058 377 ntBASIC6.05□□□□□ -1.44
LIG1P18858 RPS24P8-201ENST00000431490 402 ntBASIC6.05□□□□□ -1.44
LIG1P18858 RPEP2-201ENST00000432149 701 ntBASIC6.05□□□□□ -1.44
LIG1P18858 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 CBX1P1-201ENST00000440184 427 ntBASIC6.05□□□□□ -1.44
LIG1P18858 MTCYBP6-201ENST00000441810 138 ntBASIC6.05□□□□□ -1.44
LIG1P18858 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.05□□□□□ -1.44
LIG1P18858 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 RNU6-420P-201ENST00000458780 107 ntBASIC6.05□□□□□ -1.44
LIG1P18858 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LIG1P18858 COX6B1P2-201ENST00000489624 230 ntBASIC6.05□□□□□ -1.44
LIG1P18858 BX510359.5-201ENST00000515651 304 ntBASIC6.05□□□□□ -1.44
LIG1P18858 RNU6-445P-201ENST00000516949 107 ntBASIC6.05□□□□□ -1.44
LIG1P18858 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.05□□□□□ -1.44
LIG1P18858 IGKV2-18-201ENST00000522607 343 ntBASIC6.05□□□□□ -1.44
LIG1P18858 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.05□□□□□ -1.44
LIG1P18858 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.05□□□□□ -1.44
LIG1P18858 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.05□□□□□ -1.44
LIG1P18858 AC090312.1-201ENST00000580637 348 ntBASIC6.05□□□□□ -1.44
LIG1P18858 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.05□□□□□ -1.44
LIG1P18858 AC018638.8-201ENST00000588755 281 ntBASIC6.05□□□□□ -1.44
LIG1P18858 AC000068.2-201ENST00000608816 460 ntBASIC6.05□□□□□ -1.44
LIG1P18858 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.05□□□□□ -1.44
LIG1P18858 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.05□□□□□ -1.44
LIG1P18858 AC109583.2-201ENST00000617367 129 ntBASIC6.05□□□□□ -1.44
LIG1P18858 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.05□□□□□ -1.44
LIG1P18858 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.05□□□□□ -1.44
LIG1P18858 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LIG1P18858 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIG1P18858 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms