Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.74□□□□□ -1.17
CD44P16070 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CD44P16070 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.74□□□□□ -1.17
CD44P16070 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.74□□□□□ -1.17
CD44P16070 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CD44P16070 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CD44P16070 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CD44P16070 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.73□□□□□ -1.17
CD44P16070 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.73□□□□□ -1.17
CD44P16070 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
CD44P16070 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC7.73□□□□□ -1.17
CD44P16070 AC008555.8-201ENST00000623602 2168 ntBASIC7.73□□□□□ -1.17
CD44P16070 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CD44P16070 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CD44P16070 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC7.73□□□□□ -1.17
CD44P16070 RNU1-24P-201ENST00000364285 165 ntBASIC7.73□□□□□ -1.17
CD44P16070 RNA5SP173-201ENST00000364857 136 ntBASIC7.73□□□□□ -1.17
CD44P16070 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC7.73□□□□□ -1.17
CD44P16070 Y_RNA.405-201ENST00000383979 100 ntBASIC7.73□□□□□ -1.17
CD44P16070 Y_RNA.451-201ENST00000384200 100 ntBASIC7.73□□□□□ -1.17
CD44P16070 Y_RNA.524-201ENST00000384564 100 ntBASIC7.73□□□□□ -1.17
CD44P16070 Y_RNA.561-201ENST00000384694 100 ntBASIC7.73□□□□□ -1.17
CD44P16070 MIR152-201ENST00000385212 87 ntBASIC7.73□□□□□ -1.17
CD44P16070 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CD44P16070 DUTP5-201ENST00000406790 469 ntBASIC7.73□□□□□ -1.17
CD44P16070 RN7SKP236-201ENST00000410635 284 ntBASIC7.73□□□□□ -1.17
CD44P16070 PPIL1P1-201ENST00000423936 499 ntBASIC7.73□□□□□ -1.17
CD44P16070 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC7.73□□□□□ -1.17
CD44P16070 CYP4F34P-201ENST00000425951 481 ntBASIC7.73□□□□□ -1.17
CD44P16070 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC7.73□□□□□ -1.17
CD44P16070 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.73□□□□□ -1.17
CD44P16070 AC005517.1-201ENST00000452091 489 ntBASIC7.73□□□□□ -1.17
CD44P16070 RN7SL563P-201ENST00000481233 298 ntBASIC7.73□□□□□ -1.17
CD44P16070 AC006499.6-201ENST00000511169 607 ntBASIC7.73□□□□□ -1.17
CD44P16070 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
CD44P16070 OR5BK1P-201ENST00000550421 823 ntBASIC7.73□□□□□ -1.17
CD44P16070 AL049869.4-201ENST00000555669 178 ntBASIC7.73□□□□□ -1.17
CD44P16070 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.73□□□□□ -1.17
CD44P16070 AC104581.2-201ENST00000572227 430 ntBASIC7.73□□□□□ -1.17
CD44P16070 AC131009.3-201ENST00000621809 287 ntBASIC7.73□□□□□ -1.17
CD44P16070 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.73□□□□□ -1.17
CD44P16070 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.73□□□□□ -1.17
CD44P16070 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CD44P16070 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
CD44P16070 AC022031.1-201ENST00000585985 2593 ntBASIC7.73□□□□□ -1.17
CD44P16070 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CD44P16070 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CD44P16070 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CD44P16070 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CD44P16070 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CD44P16070 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.73□□□□□ -1.17
CD44P16070 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.72□□□□□ -1.17
CD44P16070 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.72□□□□□ -1.17
CD44P16070 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.72□□□□□ -1.17
CD44P16070 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.72□□□□□ -1.17
CD44P16070 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CD44P16070 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
CD44P16070 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.72□□□□□ -1.17
CD44P16070 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.72□□□□□ -1.17
CD44P16070 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CD44P16070 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.72□□□□□ -1.17
CD44P16070 MIR450A1-201ENST00000362262 91 ntBASIC7.72□□□□□ -1.17
CD44P16070 RNU6-211P-201ENST00000384047 107 ntBASIC7.72□□□□□ -1.17
CD44P16070 NHP2P2-201ENST00000396362 460 ntBASIC7.72□□□□□ -1.17
CD44P16070 HSPE1P8-201ENST00000406997 288 ntBASIC7.72□□□□□ -1.17
CD44P16070 AIMP1P2-201ENST00000425294 312 ntBASIC7.72□□□□□ -1.17
CD44P16070 AC234779.1-201ENST00000425910 285 ntBASIC7.72□□□□□ -1.17
CD44P16070 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.72□□□□□ -1.17
CD44P16070 AC022431.1-201ENST00000450941 438 ntBASIC7.72□□□□□ -1.17
CD44P16070 Y_RNA.651-201ENST00000459380 103 ntBASIC7.72□□□□□ -1.17
CD44P16070 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.72□□□□□ -1.17
CD44P16070 RPL34P34-201ENST00000465389 354 ntBASIC7.72□□□□□ -1.17
CD44P16070 PLGLA-201ENST00000465668 449 ntBASIC7.72□□□□□ -1.17
CD44P16070 AL355032.1-201ENST00000472981 438 ntBASIC7.72□□□□□ -1.17
CD44P16070 Z99943.2-201ENST00000507585 266 ntBASIC7.72□□□□□ -1.17
CD44P16070 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.72□□□□□ -1.17
CD44P16070 SCARNA6-201ENST00000515982 265 ntBASIC7.72□□□□□ -1.17
CD44P16070 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.72□□□□□ -1.17
CD44P16070 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.72□□□□□ -1.17
CD44P16070 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.72□□□□□ -1.17
CD44P16070 MIR4431-201ENST00000579990 94 ntBASIC7.72□□□□□ -1.17
CD44P16070 MIR4423-201ENST00000580922 80 ntBASIC7.72□□□□□ -1.17
CD44P16070 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.72□□□□□ -1.17
CD44P16070 AC008749.1-201ENST00000597650 306 ntBASIC7.72□□□□□ -1.17
CD44P16070 AL136139.1-201ENST00000605568 222 ntBASIC7.72□□□□□ -1.17
CD44P16070 SNORD39.4-201ENST00000620099 78 ntBASIC7.72□□□□□ -1.17
CD44P16070 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.72□□□□□ -1.17
CD44P16070 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.72□□□□□ -1.17
CD44P16070 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CD44P16070 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms