Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC009032.1-201ENST00000617574 431 ntBASIC3.61□□□□□ -1.83
RETP07949 AC069209.1-201ENST00000619282 651 ntBASIC3.61□□□□□ -1.83
RETP07949 AP003072.4-201ENST00000624580 310 ntBASIC3.61□□□□□ -1.83
RETP07949 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RETP07949 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
RETP07949 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RETP07949 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
RETP07949 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RETP07949 AL365361.1-201ENST00000566942 3481 ntBASIC3.61□□□□□ -1.83
RETP07949 AC021755.1-201ENST00000559747 1447 ntBASIC3.61□□□□□ -1.83
RETP07949 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RETP07949 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RETP07949 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RETP07949 MFSD8-236ENST00000641509 4050 ntBASIC3.6□□□□□ -1.83
RETP07949 RAD1P1-201ENST00000231383 813 ntBASIC3.6□□□□□ -1.83
RETP07949 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
RETP07949 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RETP07949 RPL23AP57-201ENST00000332361 466 ntBASIC3.6□□□□□ -1.83
RETP07949 NACA3P-201ENST00000359690 648 ntBASIC3.6□□□□□ -1.83
RETP07949 SNORA31-201ENST00000362607 130 ntBASIC3.6□□□□□ -1.83
RETP07949 RNU6-40P-201ENST00000384254 107 ntBASIC3.6□□□□□ -1.83
RETP07949 RNA5SP424-201ENST00000390988 115 ntBASIC3.6□□□□□ -1.83
RETP07949 SOD2P1-201ENST00000396543 562 ntBASIC3.6□□□□□ -1.83
RETP07949 AL391417.1-201ENST00000404100 426 ntBASIC3.6□□□□□ -1.83
RETP07949 RN7SKP284-201ENST00000411002 343 ntBASIC3.6□□□□□ -1.83
RETP07949 HSFY4P-201ENST00000415994 1181 ntBASIC3.6□□□□□ -1.83
RETP07949 AC127526.1-201ENST00000417526 366 ntBASIC3.6□□□□□ -1.83
RETP07949 COTL1P1-201ENST00000422309 375 ntBASIC3.6□□□□□ -1.83
RETP07949 HIGD1AP12-201ENST00000427832 281 ntBASIC3.6□□□□□ -1.83
RETP07949 MOB1AP1-201ENST00000430903 535 ntBASIC3.6□□□□□ -1.83
RETP07949 MTND2P21-201ENST00000436242 1042 ntBASIC3.6□□□□□ -1.83
RETP07949 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.6□□□□□ -1.83
RETP07949 AC006480.1-201ENST00000449887 378 ntBASIC3.6□□□□□ -1.83
RETP07949 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.6□□□□□ -1.83
RETP07949 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.6□□□□□ -1.83
RETP07949 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.6□□□□□ -1.83
RETP07949 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
RETP07949 HMGB1P46-201ENST00000520062 610 ntBASIC3.6□□□□□ -1.83
RETP07949 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.6□□□□□ -1.83
RETP07949 CYP2C60P-201ENST00000566088 139 ntBASIC3.6□□□□□ -1.83
RETP07949 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.6□□□□□ -1.83
RETP07949 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.6□□□□□ -1.83
RETP07949 AC090525.3-201ENST00000605601 189 ntBASIC3.6□□□□□ -1.83
RETP07949 AC105429.2-201ENST00000610567 517 ntBASIC3.6□□□□□ -1.83
RETP07949 AP000553.6-201ENST00000641242 118 ntBASIC3.6□□□□□ -1.83
RETP07949 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RETP07949 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RETP07949 AC096656.1-201ENST00000623826 1364 ntBASIC3.6□□□□□ -1.83
RETP07949 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
RETP07949 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RETP07949 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
RETP07949 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RETP07949 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RETP07949 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RETP07949 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RETP07949 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RETP07949 OR5T3-201ENST00000303059 1023 ntBASIC3.59□□□□□ -1.83
RETP07949 RNU4-35P-201ENST00000362588 141 ntBASIC3.59□□□□□ -1.83
RETP07949 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RETP07949 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.59□□□□□ -1.83
RETP07949 AL589655.1-201ENST00000405398 482 ntBASIC3.59□□□□□ -1.83
RETP07949 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.59□□□□□ -1.83
RETP07949 AC013404.1-201ENST00000413068 249 ntBASIC3.59□□□□□ -1.83
RETP07949 MTND4P11-201ENST00000417020 1058 ntBASIC3.59□□□□□ -1.83
RETP07949 TRIM60P13-201ENST00000432350 1283 ntBASIC3.59□□□□□ -1.83
RETP07949 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.59□□□□□ -1.83
RETP07949 SNORA71B-202ENST00000439232 272 ntBASIC3.59□□□□□ -1.83
RETP07949 RPS29P31-201ENST00000446147 164 ntBASIC3.59□□□□□ -1.83
RETP07949 PTGES3P5-201ENST00000455109 434 ntBASIC3.59□□□□□ -1.83
RETP07949 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.59□□□□□ -1.83
RETP07949 S100A11P2-201ENST00000467589 312 ntBASIC3.59□□□□□ -1.83
RETP07949 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.59□□□□□ -1.83
RETP07949 RAC1P2-201ENST00000511164 579 ntBASIC3.59□□□□□ -1.83
RETP07949 AC093770.1-201ENST00000511559 571 ntBASIC3.59□□□□□ -1.83
RETP07949 AC108120.2-201ENST00000512973 294 ntBASIC3.59□□□□□ -1.83
RETP07949 RNU6-1004P-201ENST00000516584 111 ntBASIC3.59□□□□□ -1.83
RETP07949 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.59□□□□□ -1.83
RETP07949 OR7E13P-201ENST00000526052 910 ntBASIC3.59□□□□□ -1.83
RETP07949 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.59□□□□□ -1.83
RETP07949 OR5D17P-201ENST00000531492 978 ntBASIC3.59□□□□□ -1.83
RETP07949 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.59□□□□□ -1.83
RETP07949 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.59□□□□□ -1.83
RETP07949 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.59□□□□□ -1.83
RETP07949 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.59□□□□□ -1.83
RETP07949 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.59□□□□□ -1.83
RETP07949 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.59□□□□□ -1.83
RETP07949 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.59□□□□□ -1.83
RETP07949 AC099778.2-201ENST00000610904 211 ntBASIC3.59□□□□□ -1.83
RETP07949 AL450489.1-201ENST00000612071 468 ntBASIC3.59□□□□□ -1.83
RETP07949 AC139769.3-201ENST00000618383 175 ntBASIC3.59□□□□□ -1.83
RETP07949 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.59□□□□□ -1.83
RETP07949 AL118508.4-201ENST00000624142 1176 ntBASIC3.59□□□□□ -1.83
RETP07949 SNORA50A-202ENST00000629536 136 ntBASIC3.59□□□□□ -1.83
RETP07949 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RETP07949 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
RETP07949 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.59□□□□□ -1.84
RETP07949 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RETP07949 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RETP07949 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.58□□□□□ -1.84
RETP07949 RNA5SP295-201ENST00000362655 121 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms