Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.69□□□□□ -1.98
SPTA1P02549 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.69□□□□□ -1.98
SPTA1P02549 Y_RNA.540-201ENST00000384638 111 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.69□□□□□ -1.98
SPTA1P02549 AL513043.1-201ENST00000439124 535 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 SCGB1D5P-201ENST00000515134 247 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 AC107934.2-201ENST00000518653 310 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.69□□□□□ -1.98
SPTA1P02549 SETP1-201ENST00000556014 845 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.69□□□□□ -1.98
SPTA1P02549 AC099063.3-201ENST00000642066 185 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
SPTA1P02549 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SPTA1P02549 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SPTA1P02549 USP12PY-201ENST00000427677 1064 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 AL592045.1-201ENST00000429867 352 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 AC087499.2-201ENST00000432861 149 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 RPL12P26-201ENST00000452430 487 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 AC091179.1-201ENST00000461606 579 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SPTA1P02549 AC109329.2-201ENST00000519658 482 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.69□□□□□ -1.98
SPTA1P02549 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SPTA1P02549 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.69□□□□□ -1.98
SPTA1P02549 AL353997.5-201ENST00000618886 171 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SPTA1P02549 AC103858.2-201ENST00000621471 543 ntBASIC2.69□□□□□ -1.98
SPTA1P02549 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC2.69□□□□□ -1.98
SPTA1P02549 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SPTA1P02549 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
SPTA1P02549 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.69□□□□□ -1.98
SPTA1P02549 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SPTA1P02549 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SPTA1P02549 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SPTA1P02549 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SPTA1P02549 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.68□□□□□ -1.98
SPTA1P02549 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.68□□□□□ -1.98
SPTA1P02549 CST9LP2-201ENST00000437612 320 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 NIPA2P5-201ENST00000452282 464 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SPTA1P02549 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.68□□□□□ -1.98
SPTA1P02549 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.68□□□□□ -1.98
SPTA1P02549 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.68□□□□□ -1.98
SPTA1P02549 AL442163.2-201ENST00000553912 710 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 AC017071.1-201ENST00000564407 2204 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SPTA1P02549 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
SPTA1P02549 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SPTA1P02549 AC018555.1-201ENST00000567548 1980 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 AC019072.1-201ENST00000604535 1551 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SPTA1P02549 RPS4XP7-201ENST00000406274 780 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 AL590103.1-201ENST00000434488 307 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SPTA1P02549 AC044913.1-201ENST00000557200 430 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 MIR6817-201ENST00000615588 66 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 AC244205.2-202ENST00000635781 342 ntBASIC2.68□□□□□ -1.98
SPTA1P02549 AL356274.2-201ENST00000624379 3752 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SPTA1P02549 RNU6-14P-201ENST00000384630 106 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 RNA5SP21-201ENST00000410917 96 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 AC126124.2-201ENST00000413542 321 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 SNRPGP5-201ENST00000456003 220 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 AC022795.1-201ENST00000473808 480 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 RPS26P15-201ENST00000488067 348 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.67□□□□□ -1.98
SPTA1P02549 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.67□□□□□ -1.98
SPTA1P02549 AC015712.3-201ENST00000559380 164 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.67□□□□□ -1.98
SPTA1P02549 AL110115.1-201ENST00000614396 364 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 AP004607.9-201ENST00000618202 316 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SPTA1P02549 AC005539.1-201ENST00000443768 1479 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SPTA1P02549 AC020633.1-201ENST00000468439 2247 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SPTA1P02549 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SPTA1P02549 AP000942.1-201ENST00000463969 747 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
SPTA1P02549 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SPTA1P02549 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2.67□□□□□ -1.98
SPTA1P02549 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.67□□□□□ -1.98
SPTA1P02549 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.67□□□□□ -1.98
SPTA1P02549 MIR4781-201ENST00000585250 76 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 AC007938.3-201ENST00000604965 623 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 AC233309.1-201ENST00000619522 751 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 ZNF658B-202ENST00000615961 3375 ntBASIC2.67□□□□□ -1.98
SPTA1P02549 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SPTA1P02549 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SPTA1P02549 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SPTA1P02549 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SPTA1P02549 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SPTA1P02549 RPL7P26-201ENST00000333817 754 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.66□□□□□ -1.98
SPTA1P02549 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.66□□□□□ -1.98
SPTA1P02549 MIR34A-201ENST00000385130 110 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 RNA5SP425-201ENST00000410336 112 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.66□□□□□ -1.98
SPTA1P02549 MTCO3P16-201ENST00000454456 754 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms