Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC006518.2-201ENST00000542513 940 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 AL121576.1-201ENST00000556055 276 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC090877.1-201ENST00000561418 344 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC022069.1-201ENST00000582910 658 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC133794.1-201ENST00000602731 914 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC016542.1-201ENST00000608259 493 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AL121772.2-201ENST00000614331 297 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 AC068880.4-201ENST00000623082 495 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF6Q9Y252 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF6Q9Y252 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
RNF6Q9Y252 ELL2P4-201ENST00000446870 1376 ntBASIC3.59□□□□□ -1.83
RNF6Q9Y252 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RNF6Q9Y252 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RNF6Q9Y252 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.59□□□□□ -1.84
RNF6Q9Y252 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 MIR208A-201ENST00000362287 71 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 SNORD46.1-201ENST00000364139 104 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 RNU6-353P-201ENST00000364266 108 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 RNU6-207P-201ENST00000384137 107 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AL355379.1-201ENST00000405542 640 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AL355615.1-201ENST00000406187 641 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 SNORA57.3-201ENST00000411095 141 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 RPL7AP73-201ENST00000413490 353 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 YME1L1P1-201ENST00000429435 297 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 NOTCH2P1-201ENST00000443481 624 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 RPL7P15-201ENST00000461190 712 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 TRBV12-2-201ENST00000489763 344 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 NIPA2P2-201ENST00000496376 1083 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC119751.1-201ENST00000513357 765 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 RN7SKP83-201ENST00000516512 178 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 OR6C73P-201ENST00000546432 358 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AC007566.2-201ENST00000603642 413 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 AP004247.3-201ENST00000608682 624 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AP000943.4-201ENST00000622912 357 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 C2orf27A-204ENST00000623058 969 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 AL161912.2-201ENST00000565707 3007 ntBASIC3.58□□□□□ -1.84
RNF6Q9Y252 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF6Q9Y252 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF6Q9Y252 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF6Q9Y252 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF6Q9Y252 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF6Q9Y252 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF6Q9Y252 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF6Q9Y252 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF6Q9Y252 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 XIAPP3-201ENST00000312918 795 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 OR4A15-201ENST00000314706 1035 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 RNA5SP387-201ENST00000364226 106 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF6Q9Y252 MIR30B-201ENST00000384850 88 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 SFR1P1-201ENST00000403720 688 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 GSTA8P-201ENST00000404253 637 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 SNORA11.1-201ENST00000408133 129 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 RN7SKP156-201ENST00000410308 342 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC069282.1-201ENST00000411911 526 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 RAB9AP3-201ENST00000412737 573 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 OR51A3P-201ENST00000413596 924 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms