Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 AC068880.4-201ENST00000623082 495 ntBASIC4.14□□□□□ -1.75
SALL1Q9NSC2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SALL1Q9NSC2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.14□□□□□ -1.75
SALL1Q9NSC2 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SALL1Q9NSC2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SALL1Q9NSC2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.14□□□□□ -1.75
SALL1Q9NSC2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 RNU6-532P-201ENST00000384318 107 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 MIR92A2-201ENST00000385299 75 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 HMGB1P10-201ENST00000395823 563 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 RNU2-17P-201ENST00000410290 190 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 BX323014.1-201ENST00000412876 237 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 HSFY7P-201ENST00000432672 318 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 AL512661.1-201ENST00000434586 1253 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 HSFY8P-201ENST00000437934 318 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 CYCSP32-201ENST00000440548 321 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 HSFY5P-201ENST00000453726 309 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 AC010683.1-201ENST00000473673 378 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 AC021146.1-201ENST00000511202 716 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 MIR4512-201ENST00000583257 77 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 AC005000.2-201ENST00000605468 310 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 MIR8084-201ENST00000614105 89 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 AC139769.3-201ENST00000618383 175 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 HSPA8P1-201ENST00000425843 1833 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 AL035425.3-201ENST00000564206 4996 ntBASIC4.13□□□□□ -1.75
SALL1Q9NSC2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
SALL1Q9NSC2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 RNA5SP235-201ENST00000365411 114 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 U3.19-201ENST00000390893 196 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC096664.2-201ENST00000411843 406 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AL158050.1-201ENST00000416077 457 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC127526.1-201ENST00000417526 366 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC115115.1-201ENST00000449927 248 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC025459.1-201ENST00000504072 156 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC018797.3-201ENST00000513388 1241 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 RNU6-347P-201ENST00000516658 105 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 RN7SKP57-201ENST00000517248 293 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 C1DP5-201ENST00000525775 383 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 CKS1BP3-201ENST00000600888 237 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 OR2BH1P-201ENST00000608850 864 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 AC010872.1-201ENST00000624225 675 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL1Q9NSC2 Z83843.1-201ENST00000604070 3685 ntBASIC4.12□□□□□ -1.75
SALL1Q9NSC2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SALL1Q9NSC2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SALL1Q9NSC2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SALL1Q9NSC2 RNU4-31P-201ENST00000384211 141 ntBASIC4.11□□□□□ -1.75
SALL1Q9NSC2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.11□□□□□ -1.75
SALL1Q9NSC2 RNU4-27P-201ENST00000410889 139 ntBASIC4.11□□□□□ -1.75
SALL1Q9NSC2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.11□□□□□ -1.75
SALL1Q9NSC2 XKRYP4-201ENST00000414395 483 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms