Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AP004372.1-201ENST00000604842 844 ntBASIC2.84□□□□□ -1.96
CHD8Q9HCK8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CHD8Q9HCK8 AC083843.2-201ENST00000568248 6253 ntBASIC2.84□□□□□ -1.96
CHD8Q9HCK8 LINC01355-201ENST00000566551 5444 ntBASIC2.84□□□□□ -1.96
CHD8Q9HCK8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.84□□□□□ -1.96
CHD8Q9HCK8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 RNU6-859P-201ENST00000362728 107 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 SNORA71.1-201ENST00000364523 117 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 RNA5SP425-201ENST00000410336 112 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AC004448.2-201ENST00000422360 586 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 NPM1P17-201ENST00000479221 602 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 GAPDHP39-201ENST00000481866 979 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AC106785.3-201ENST00000564064 847 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AL109809.4-201ENST00000603520 2185 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AC118273.1-201ENST00000525324 3006 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 NPM1P24-201ENST00000428039 894 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AC008280.2-201ENST00000455473 307 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 ELOCP31-201ENST00000540463 467 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AC011602.1-201ENST00000546484 331 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 LSM3P2-201ENST00000551246 273 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 AC022106.2-201ENST00000620114 757 ntBASIC2.83□□□□□ -1.96
CHD8Q9HCK8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHD8Q9HCK8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 ANP32BP2-201ENST00000454525 545 ntBASIC2.82□□□□□ -1.96
CHD8Q9HCK8 NPM1P28-201ENST00000492269 840 ntBASIC2.82□□□□□ -1.96
CHD8Q9HCK8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 AC021146.3-201ENST00000511911 260 ntBASIC2.82□□□□□ -1.96
CHD8Q9HCK8 SEC11B-201ENST00000518383 499 ntBASIC2.82□□□□□ -1.96
CHD8Q9HCK8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 SNORA4-201ENST00000584302 138 ntBASIC2.82□□□□□ -1.96
CHD8Q9HCK8 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 AC073325.2-201ENST00000339545 159 ntBASIC2.82□□□□□ -1.96
CHD8Q9HCK8 RN7SKP116-201ENST00000516902 319 ntBASIC2.82□□□□□ -1.96
CHD8Q9HCK8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 SERPINE4P-201ENST00000554978 281 ntBASIC2.82□□□□□ -1.96
CHD8Q9HCK8 APOOP1-201ENST00000604695 592 ntBASIC2.82□□□□□ -1.96
CHD8Q9HCK8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CHD8Q9HCK8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 RNA5SP490-201ENST00000517141 136 ntBASIC2.81□□□□□ -1.96
CHD8Q9HCK8 AC027176.1-201ENST00000560204 514 ntBASIC2.81□□□□□ -1.96
CHD8Q9HCK8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 RNVU1-3-201ENST00000364313 161 ntBASIC2.81□□□□□ -1.96
CHD8Q9HCK8 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 AL645937.1-202ENST00000421799 937 ntBASIC2.81□□□□□ -1.96
CHD8Q9HCK8 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.81□□□□□ -1.96
CHD8Q9HCK8 SNRPGP5-201ENST00000456003 220 ntBASIC2.81□□□□□ -1.96
CHD8Q9HCK8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 MIR3199-1-201ENST00000582434 88 ntBASIC2.81□□□□□ -1.96
CHD8Q9HCK8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 AC022509.4-201ENST00000621404 572 ntBASIC2.81□□□□□ -1.96
CHD8Q9HCK8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CHD8Q9HCK8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
CHD8Q9HCK8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
CHD8Q9HCK8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHD8Q9HCK8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.8□□□□□ -1.96
CHD8Q9HCK8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.8□□□□□ -1.96
CHD8Q9HCK8 AL121882.1-201ENST00000422893 417 ntBASIC2.8□□□□□ -1.96
CHD8Q9HCK8 ARL4AP1-201ENST00000503220 705 ntBASIC2.8□□□□□ -1.96
CHD8Q9HCK8 AC017037.1-201ENST00000508460 471 ntBASIC2.8□□□□□ -1.96
CHD8Q9HCK8 SNORA31.21-201ENST00000517180 77 ntBASIC2.8□□□□□ -1.96
CHD8Q9HCK8 TRAV11-201ENST00000539512 339 ntBASIC2.8□□□□□ -1.96
CHD8Q9HCK8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.8□□□□□ -1.96
CHD8Q9HCK8 PLCE1P1-201ENST00000622094 305 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms