Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 WDR91-202ENST00000423565 4500 ntTSL 5 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 MON2-214ENST00000641654 10382 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 WIPF2-201ENST00000323571 7474 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 MIR210-201ENST00000362168 110 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 SNORD38.1-201ENST00000363863 68 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 Y_RNA.247-201ENST00000364500 92 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 RNU6-217P-201ENST00000384164 104 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 TRBV20-1-201ENST00000390394 413 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 MIR300-201ENST00000401138 83 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 Y_RNA.621-201ENST00000411065 96 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 LINC02068-201ENST00000418839 3212 ntTSL 2 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 AL365356.4-201ENST00000425246 613 ntTSL 3 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 PQLC1P1-201ENST00000434950 429 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 AL355076.1-201ENST00000484315 270 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 SCARNA16-201ENST00000515981 187 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 Y_RNA.660-201ENST00000516002 120 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 SNORD36C-201ENST00000516733 66 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 VENTXP6-201ENST00000521543 314 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 AL133399.1-201ENST00000527476 298 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 RAD52-217ENST00000544742 463 ntTSL 4 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 AC004706.2-201ENST00000576277 294 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL531P-201ENST00000578464 282 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 AC011467.3-201ENST00000599738 429 ntTSL 5 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 Metazoa_SRP.92-201ENST00000613789 329 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 KF456110.1-201ENST00000641105 385 ntBASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRTAP3-3Q9BYR6 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 LONP2-201ENST00000285737 8199 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 ADGRG1-202ENST00000456916 3860 ntTSL 2 BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
KRTAP3-3Q9BYR6 INTS6P1-201ENST00000504674 2530 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 MAPK10-312ENST00000641391 2488 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 MAPK10-378ENST00000642009 2463 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 UNC5D-205ENST00000449677 2448 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ABCC11-202ENST00000356608 4612 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 PRRG3-201ENST00000370353 5977 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF271P-202ENST00000465539 1970 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ASTN2-204ENST00000358637 3411 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 TSHZ1-201ENST00000322038 4992 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 NELL2-212ENST00000549027 3036 ntTSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AP002490.1-201ENST00000502284 4233 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR296-201ENST00000385215 80 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms