Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 MIR585-201ENST00000384887 94 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 RNU6-952P-201ENST00000391164 108 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC007066.1-201ENST00000392902 381 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AL357515.1-201ENST00000402967 542 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 ARL4AP5-201ENST00000404372 599 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AL355379.1-201ENST00000405542 640 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 MTATP6P27-201ENST00000416987 621 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 Z99497.1-201ENST00000421282 135 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 RPL7P57-201ENST00000423238 740 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 RPS27AP12-201ENST00000429552 465 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 MTND1P30-201ENST00000441241 901 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 MTND5P14-201ENST00000441481 1267 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC118469.1-201ENST00000442943 488 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 ZNF114P1-201ENST00000453500 292 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 SETP11-201ENST00000473027 690 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC017015.1-201ENST00000477387 286 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 GAPDHP56-201ENST00000506031 988 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC093809.1-201ENST00000509155 340 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 TMEM248P1-201ENST00000510579 951 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 PTGES3P3-201ENST00000511479 482 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 BTF3P13-201ENST00000513224 490 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 MYL12AP1-201ENST00000518490 515 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC090151.1-201ENST00000520784 730 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC100770.1-201ENST00000532310 322 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 BGLT3-201ENST00000564523 994 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC015912.2-201ENST00000571053 181 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AL121834.1-201ENST00000572284 509 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC141257.3-201ENST00000572906 215 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC053481.3-201ENST00000577881 843 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC010424.2-201ENST00000607594 443 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 FAM25E-202ENST00000608562 189 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 MIR7844-201ENST00000616161 122 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 U73479.1-201ENST00000618062 168 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AL023881.1-201ENST00000621088 301 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC004009.2-201ENST00000623016 728 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC091953.3-201ENST00000623220 236 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AC006927.3-201ENST00000638789 384 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 AL031985.3-201ENST00000565390 2449 ntBASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.12□□□□□ -1.75
RAB40AQ8WXH6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 NCLP2-201ENST00000416078 1462 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 KPNA2P2-201ENST00000419546 1489 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 Y_RNA.493-201ENST00000384422 102 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 RPS24P12-201ENST00000402084 394 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 LAP3P1-201ENST00000403648 294 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 MIR320C1-201ENST00000408566 88 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 RPL37P18-201ENST00000411602 243 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 TPMTP3-201ENST00000411928 735 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 HMGB1P11-201ENST00000413899 637 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 MTCYBP24-201ENST00000420387 1106 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 AC092647.1-201ENST00000420654 287 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 MTCO2P5-201ENST00000422621 426 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 PSMA6P3-201ENST00000428242 164 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 AL049745.1-201ENST00000433953 286 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 RPL7P11-201ENST00000437586 658 ntBASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40AQ8WXH6 AC091685.2-201ENST00000454924 864 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms