Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU2-28P-201ENST00000410457 189 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AL133547.1-201ENST00000448546 220 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC090013.1-201ENST00000485147 480 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 OR4G11P-201ENST00000492842 939 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 RNU6-583P-201ENST00000516012 92 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 RNA5SP216-201ENST00000516111 123 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AGGF1P4-201ENST00000568249 801 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 SNORA74C-1-201ENST00000580726 201 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC233702.9-201ENST00000581528 203 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC053481.4-201ENST00000583164 216 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 MIR6875-201ENST00000617506 72 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC006971.1-201ENST00000407916 4486 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC021146.4-201ENST00000309229 279 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 RNU1-132P-201ENST00000364300 164 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 RNA5SP241-201ENST00000391326 114 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AL035079.1-201ENST00000405210 287 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC073264.1-201ENST00000411508 416 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 MTCO3P30-201ENST00000426425 670 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC073335.1-201ENST00000427776 363 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 RPL7AP49-201ENST00000429522 581 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AL591438.1-201ENST00000433508 581 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 SNRPGP9-201ENST00000456025 225 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 MTCYBP43-201ENST00000513621 740 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AP001094.1-201ENST00000579805 193 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 RN7SL435P-201ENST00000584418 282 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 DEFB131E-202ENST00000602581 683 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC084757.4-201ENST00000616350 526 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC231657.1-201ENST00000624313 397 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC092184.1-201ENST00000625042 715 ntBASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.53□□□□□ -1.52
SMC1BQ8NDV3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AL079343.1-201ENST00000572358 1771 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 MTCO1P14-201ENST00000441695 1559 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 RNU6-660P-201ENST00000364566 109 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 MIR659-201ENST00000384963 97 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AC097374.1-203ENST00000400783 485 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AL450338.1-201ENST00000407987 512 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 U3.35-201ENST00000408405 208 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AL663109.1-201ENST00000411498 844 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms