Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AC009951.1-201ENST00000623674 2614 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 RNU6-1120P-201ENST00000362988 108 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 MIR550A3-201ENST00000390735 95 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 RNU6-278P-201ENST00000390945 109 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 BTF3L4P3-201ENST00000418879 476 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 RGS17P1-201ENST00000423358 553 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 RPL7P54-201ENST00000438336 674 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AL353691.1-201ENST00000451332 387 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 snoU109.4-201ENST00000458953 143 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AC053481.1-201ENST00000467217 306 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 RPL36AP51-201ENST00000487216 318 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 NIPA2P2-201ENST00000496376 1083 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 RN7SKP116-201ENST00000516902 319 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AC027667.1-201ENST00000545814 304 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 MIR4795-201ENST00000584182 89 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AL162730.1-201ENST00000605734 292 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AC093788.1-201ENST00000609356 927 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AL049794.2-201ENST00000616301 365 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AC002550.2-201ENST00000621246 394 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AP003122.6-201ENST00000623831 495 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AC091925.2-201ENST00000625059 256 ntBASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS4Q8IUM7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC027287.1-201ENST00000553115 1453 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC011493.1-201ENST00000596753 1632 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 RNA5SP223-201ENST00000365174 120 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 RNU1-39P-201ENST00000383897 165 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 RNU6-821P-201ENST00000390995 107 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 GLULP6-201ENST00000399502 913 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AL590004.1-201ENST00000405321 300 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 SNRPEP10-201ENST00000420249 274 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 ELOCP18-201ENST00000434209 337 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 SEPT14P3-201ENST00000439401 183 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AL732372.2-207ENST00000445840 183 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 REG1CP-206ENST00000447469 496 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 SEPT14P2-201ENST00000453405 183 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AL389915.2-201ENST00000454576 441 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 RN7SL97P-201ENST00000486780 299 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 SEPT14P4-201ENST00000513445 186 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 RNA5SP337-201ENST00000517007 109 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 FO082796.1-201ENST00000523795 183 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC022616.3-201ENST00000523940 148 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 OR4R1P-201ENST00000529879 463 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 RPS3AP23-202ENST00000574601 686 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 MIR4646-201ENST00000580775 63 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC073091.2-201ENST00000603205 907 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC115621.1-201ENST00000604653 858 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 Mico1.1-201ENST00000611698 204 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 U73479.1-201ENST00000618062 168 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC015871.5-202ENST00000623252 701 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 AC074101.1-201ENST00000637861 241 ntBASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms