Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13CQ709C8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13CQ709C8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 AL160275.2-201ENST00000412010 394 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 MIR4498-201ENST00000577599 66 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13CQ709C8 ELL2P4-201ENST00000446870 1376 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13CQ709C8 Y_RNA.540-201ENST00000384638 111 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 RPL7P20-201ENST00000520308 745 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13CQ709C8 AC107081.3-201ENST00000612715 2034 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13CQ709C8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13CQ709C8 RNA5SP99-201ENST00000364020 114 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 RPL32P35-201ENST00000415214 394 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 AC048351.1-201ENST00000420064 602 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 MTCO1P52-201ENST00000433928 531 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 TRIM60P18-201ENST00000441518 828 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 AC010620.2-201ENST00000600135 313 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 AC015813.4-201ENST00000610469 179 ntBASIC2.31□□□□□ -2.04
VPS13CQ709C8 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS13CQ709C8 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS13CQ709C8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13CQ709C8 Y_RNA.796-201ENST00000364268 102 ntBASIC2.3□□□□□ -2.04
VPS13CQ709C8 Y_RNA.799-201ENST00000364992 102 ntBASIC2.3□□□□□ -2.04
VPS13CQ709C8 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 AP001646.1-201ENST00000527936 915 ntBASIC2.3□□□□□ -2.04
VPS13CQ709C8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13CQ709C8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 RPL7P25-201ENST00000404151 721 ntBASIC2.3□□□□□ -2.04
VPS13CQ709C8 SNORA3.2-201ENST00000408221 125 ntBASIC2.3□□□□□ -2.04
VPS13CQ709C8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 AL592045.1-201ENST00000429867 352 ntBASIC2.3□□□□□ -2.04
VPS13CQ709C8 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 AC079228.1-201ENST00000624774 1049 ntBASIC2.3□□□□□ -2.04
VPS13CQ709C8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13CQ709C8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13CQ709C8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13CQ709C8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13CQ709C8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13CQ709C8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 RNA5SP458-201ENST00000516188 119 ntBASIC2.3□□□□□ -2.04
VPS13CQ709C8 NSRP1P1-201ENST00000444067 1693 ntBASIC2.3□□□□□ -2.04
VPS13CQ709C8 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VPS13CQ709C8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13CQ709C8 MIR26A1-201ENST00000362205 77 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 U8.2-201ENST00000363156 134 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 KATNBL1P2-201ENST00000433311 835 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 AC022795.1-201ENST00000473808 480 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 AC108078.3-201ENST00000502633 489 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13CQ709C8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13CQ709C8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 SNORA31.21-201ENST00000517180 77 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 OR11H5P-201ENST00000554039 926 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 AC007424.1-203ENST00000554613 687 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 HMGB1P50-201ENST00000605814 607 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13CQ709C8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 AC010300.1-201ENST00000600671 5134 ntBASIC2.29□□□□□ -2.04
VPS13CQ709C8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
VPS13CQ709C8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms