Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 DPH3P2-201ENST00000422618 250 ntBASIC2.82□□□□□ -1.96
RIF1Q5UIP0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 MIR4498-201ENST00000577599 66 ntBASIC2.82□□□□□ -1.96
RIF1Q5UIP0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
RIF1Q5UIP0 AC125336.1-201ENST00000508893 2827 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AL137014.1-201ENST00000420490 1226 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AC116337.1-201ENST00000509680 687 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 RNU1-143P-201ENST00000516296 146 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 NTAN1P1-201ENST00000603150 646 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 U1.23-201ENST00000610293 146 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 RNU1-68P-201ENST00000615382 146 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 U1.39-201ENST00000621562 146 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 MFSD8-233ENST00000641482 4860 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AC017071.1-201ENST00000564407 2204 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 MAPK10-253ENST00000641010 4072 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 RNU6-618P-201ENST00000363518 112 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 MIR27B-201ENST00000385129 97 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 PTP4A1P5-201ENST00000420305 455 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 DUTP6-201ENST00000425573 462 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 RPL36AP21-201ENST00000490372 323 ntBASIC2.81□□□□□ -1.96
RIF1Q5UIP0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
RIF1Q5UIP0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AL161781.1-201ENST00000354277 403 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 B3GNT2P1-201ENST00000434960 952 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AC091179.1-201ENST00000461606 579 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 SULT1C2P2-201ENST00000562517 294 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 SYT14P1-202ENST00000600441 1448 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AC015871.2-201ENST00000603605 948 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 RPL21P132-201ENST00000331267 462 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 SNORA36C-201ENST00000384289 132 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 GSTM3P2-201ENST00000412746 530 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AL592045.1-201ENST00000429867 352 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 OR4K7P-201ENST00000580232 945 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AC046143.2-201ENST00000609789 160 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 AC073476.4-201ENST00000628409 72 ntBASIC2.8□□□□□ -1.96
RIF1Q5UIP0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
RIF1Q5UIP0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.79□□□□□ -1.96
RIF1Q5UIP0 AL139039.1-201ENST00000401900 692 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms