Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RPL7P15-201ENST00000461190 712 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AC024560.2-201ENST00000507981 1497 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 RNA5SP230-201ENST00000517039 122 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.59□□□□□ -1.67
CLRN1P58418 IGKV2-18-201ENST00000522607 343 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.59□□□□□ -1.67
CLRN1P58418 AC024940.3-201ENST00000538551 316 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 AC025574.1-201ENST00000554784 1653 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AL157687.1-201ENST00000554853 619 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.59□□□□□ -1.67
CLRN1P58418 AC040958.1-201ENST00000561102 201 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 RN7SL802P-201ENST00000577858 299 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 AC011840.5-201ENST00000582125 771 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.59□□□□□ -1.67
CLRN1P58418 AC005730.3-201ENST00000583067 366 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AL353997.4-201ENST00000586196 166 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLRN1P58418 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.59□□□□□ -1.67
CLRN1P58418 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.59□□□□□ -1.67
CLRN1P58418 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.59□□□□□ -1.67
CLRN1P58418 OR10AB1P-201ENST00000609613 938 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AC063943.3-201ENST00000615562 356 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 MIR6864-201ENST00000617935 70 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AC009159.1-201ENST00000618386 642 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AC092376.2-201ENST00000622621 4116 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 AP002505.2-201ENST00000623585 696 ntBASIC4.59□□□□□ -1.67
CLRN1P58418 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.59□□□□□ -1.67
CLRN1P58418 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CLRN1P58418 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
CLRN1P58418 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.59□□□□□ -1.68
CLRN1P58418 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.59□□□□□ -1.68
CLRN1P58418 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CLRN1P58418 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CLRN1P58418 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.58□□□□□ -1.68
CLRN1P58418 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
CLRN1P58418 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.58□□□□□ -1.68
CLRN1P58418 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.58□□□□□ -1.68
CLRN1P58418 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.58□□□□□ -1.68
CLRN1P58418 CASC19-280ENST00000642102 1351 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 RNU6-28P-201ENST00000362378 107 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 Y_RNA.89-201ENST00000363031 102 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 RN7SKP162-201ENST00000363605 345 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 RN7SKP113-201ENST00000363891 295 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 RNU6-534P-201ENST00000364877 106 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 Y_RNA.295-201ENST00000364918 102 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 RNU1-43P-201ENST00000365052 165 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 RNU6-876P-201ENST00000391295 104 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC092642.1-201ENST00000392417 425 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 RN7SKP285-201ENST00000410137 318 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC078974.1-201ENST00000411597 223 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.58□□□□□ -1.68
CLRN1P58418 MTND3P17-201ENST00000416968 344 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 USP9YP27-201ENST00000418455 438 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AL592293.2-201ENST00000422292 996 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC133104.1-201ENST00000429100 218 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 MTND3P23-201ENST00000431980 347 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 USP12PX-201ENST00000432383 1057 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.58□□□□□ -1.68
CLRN1P58418 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.58□□□□□ -1.68
CLRN1P58418 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.58□□□□□ -1.68
CLRN1P58418 AC132479.1-201ENST00000449160 144 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.58□□□□□ -1.68
CLRN1P58418 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.58□□□□□ -1.68
CLRN1P58418 RN7SL443P-201ENST00000464331 290 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC087312.1-201ENST00000471411 480 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.58□□□□□ -1.68
CLRN1P58418 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.58□□□□□ -1.68
CLRN1P58418 RFPL4AP5-201ENST00000514977 504 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 SNORA20.3-201ENST00000516880 132 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.58□□□□□ -1.68
CLRN1P58418 AL512360.1-201ENST00000555346 234 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC127381.1-201ENST00000555979 939 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.58□□□□□ -1.68
CLRN1P58418 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.58□□□□□ -1.68
CLRN1P58418 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.58□□□□□ -1.68
CLRN1P58418 AL391646.1-201ENST00000603860 190 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC011468.4-201ENST00000603942 409 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC055876.5-201ENST00000605667 259 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 MIR98-201ENST00000606724 119 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.58□□□□□ -1.68
CLRN1P58418 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 AC004009.2-201ENST00000623016 728 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 OR9K1P-202ENST00000641111 3217 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.58□□□□□ -1.68
CLRN1P58418 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 AC092125.1-201ENST00000562568 1995 ntBASIC4.58□□□□□ -1.68
CLRN1P58418 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLRN1P58418 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.58□□□□□ -1.68
CLRN1P58418 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms