Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC004987.4-201ENST00000603383 338 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AL133338.2-201ENST00000604292 736 ntBASIC3.62□□□□□ -1.83
CDX1P47902 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.62□□□□□ -1.83
CDX1P47902 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 AL138721.1-201ENST00000616756 179 ntBASIC3.62□□□□□ -1.83
CDX1P47902 MIR7703-201ENST00000620784 77 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AP002782.1-201ENST00000623107 614 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AL359757.1-201ENST00000623176 255 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AC040168.1-201ENST00000623594 991 ntBASIC3.62□□□□□ -1.83
CDX1P47902 CR381572.1-201ENST00000625098 102 ntBASIC3.62□□□□□ -1.83
CDX1P47902 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.62□□□□□ -1.83
CDX1P47902 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.62□□□□□ -1.83
CDX1P47902 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.62□□□□□ -1.83
CDX1P47902 AC108467.2-201ENST00000617640 1597 ntBASIC3.62□□□□□ -1.83
CDX1P47902 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.62□□□□□ -1.83
CDX1P47902 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDX1P47902 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDX1P47902 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDX1P47902 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDX1P47902 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.61□□□□□ -1.83
CDX1P47902 RNU1-15P-201ENST00000353977 144 ntBASIC3.61□□□□□ -1.83
CDX1P47902 RNU1-32P-201ENST00000363937 159 ntBASIC3.61□□□□□ -1.83
CDX1P47902 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CDX1P47902 RNU6-878P-201ENST00000384578 110 ntBASIC3.61□□□□□ -1.83
CDX1P47902 RNU6-821P-201ENST00000390995 107 ntBASIC3.61□□□□□ -1.83
CDX1P47902 UBTFL3-201ENST00000418934 1024 ntBASIC3.61□□□□□ -1.83
CDX1P47902 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.61□□□□□ -1.83
CDX1P47902 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.61□□□□□ -1.83
CDX1P47902 AC009480.2-201ENST00000422916 432 ntBASIC3.61□□□□□ -1.83
CDX1P47902 GLRXP1-201ENST00000423261 334 ntBASIC3.61□□□□□ -1.83
CDX1P47902 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.61□□□□□ -1.83
CDX1P47902 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.61□□□□□ -1.83
CDX1P47902 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.61□□□□□ -1.83
CDX1P47902 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.61□□□□□ -1.83
CDX1P47902 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.61□□□□□ -1.83
CDX1P47902 ARL2BPP10-201ENST00000446487 531 ntBASIC3.61□□□□□ -1.83
CDX1P47902 NECAP1P2-201ENST00000455668 727 ntBASIC3.61□□□□□ -1.83
CDX1P47902 UBTFL6-201ENST00000477929 1024 ntBASIC3.61□□□□□ -1.83
CDX1P47902 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CDX1P47902 RPL36AP41-201ENST00000493820 306 ntBASIC3.61□□□□□ -1.83
CDX1P47902 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.61□□□□□ -1.83
CDX1P47902 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDX1P47902 AC111000.3-201ENST00000508057 576 ntBASIC3.61□□□□□ -1.83
CDX1P47902 AC002456.2-201ENST00000509356 380 ntBASIC3.61□□□□□ -1.83
CDX1P47902 RAB9BP1-201ENST00000519581 626 ntBASIC3.61□□□□□ -1.83
CDX1P47902 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.61□□□□□ -1.83
CDX1P47902 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.61□□□□□ -1.83
CDX1P47902 AC010198.2-201ENST00000550612 259 ntBASIC3.61□□□□□ -1.83
CDX1P47902 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.61□□□□□ -1.83
CDX1P47902 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.61□□□□□ -1.83
CDX1P47902 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.61□□□□□ -1.83
CDX1P47902 AC015912.2-201ENST00000571053 181 ntBASIC3.61□□□□□ -1.83
CDX1P47902 AC006270.2-201ENST00000578523 652 ntBASIC3.61□□□□□ -1.83
CDX1P47902 MAGOH2P-202ENST00000584384 429 ntBASIC3.61□□□□□ -1.83
CDX1P47902 RPL23AP92-201ENST00000603609 255 ntBASIC3.61□□□□□ -1.83
CDX1P47902 BNIP3P11-201ENST00000603878 563 ntBASIC3.61□□□□□ -1.83
CDX1P47902 AC034229.4-201ENST00000607861 441 ntBASIC3.61□□□□□ -1.83
CDX1P47902 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.61□□□□□ -1.83
CDX1P47902 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDX1P47902 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.61□□□□□ -1.83
CDX1P47902 OR5BR1P-201ENST00000524992 1330 ntBASIC3.61□□□□□ -1.83
CDX1P47902 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
CDX1P47902 AL157700.1-201ENST00000561973 1432 ntBASIC3.61□□□□□ -1.83
CDX1P47902 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDX1P47902 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDX1P47902 MARK2P15-201ENST00000432204 2186 ntBASIC3.61□□□□□ -1.83
CDX1P47902 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
CDX1P47902 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
CDX1P47902 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CDX1P47902 AC005539.1-201ENST00000443768 1479 ntBASIC3.6□□□□□ -1.83
CDX1P47902 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDX1P47902 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.6□□□□□ -1.83
CDX1P47902 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDX1P47902 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.6□□□□□ -1.83
CDX1P47902 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDX1P47902 OR56B2P-202ENST00000641377 2453 ntBASIC3.6□□□□□ -1.83
CDX1P47902 XIAPP3-201ENST00000312918 795 ntBASIC3.6□□□□□ -1.83
CDX1P47902 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.6□□□□□ -1.83
CDX1P47902 MIR129-1-201ENST00000384972 72 ntBASIC3.6□□□□□ -1.83
CDX1P47902 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.6□□□□□ -1.83
CDX1P47902 RNA5SP332-201ENST00000391063 115 ntBASIC3.6□□□□□ -1.83
CDX1P47902 AL583834.1-201ENST00000406943 343 ntBASIC3.6□□□□□ -1.83
CDX1P47902 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDX1P47902 RNU2-15P-201ENST00000410692 191 ntBASIC3.6□□□□□ -1.83
CDX1P47902 RPS3AP25-201ENST00000411660 793 ntBASIC3.6□□□□□ -1.83
CDX1P47902 ELOCP9-201ENST00000418624 239 ntBASIC3.6□□□□□ -1.83
CDX1P47902 HMGB1P49-201ENST00000418882 569 ntBASIC3.6□□□□□ -1.83
CDX1P47902 UQCRBP1-201ENST00000421129 336 ntBASIC3.6□□□□□ -1.83
CDX1P47902 AL592293.2-201ENST00000422292 996 ntBASIC3.6□□□□□ -1.83
CDX1P47902 RPS27AP7-201ENST00000422792 455 ntBASIC3.6□□□□□ -1.83
CDX1P47902 AL139421.1-201ENST00000423010 169 ntBASIC3.6□□□□□ -1.83
CDX1P47902 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.6□□□□□ -1.83
CDX1P47902 MTND4P6-201ENST00000438297 472 ntBASIC3.6□□□□□ -1.83
CDX1P47902 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.6□□□□□ -1.83
CDX1P47902 FGF7P5-201ENST00000441829 291 ntBASIC3.6□□□□□ -1.83
CDX1P47902 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms