Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 SNORA70.2-201ENST00000364506 135 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 RNU6-413P-201ENST00000384115 107 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 Y_RNA.472-201ENST00000384322 102 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 RN7SKP177-201ENST00000410567 355 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 RNU4-6P-201ENST00000410804 122 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 RPS3AP37-201ENST00000419176 745 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD13P35453 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
HOXD13P35453 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 GSTA7P-201ENST00000438425 448 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 AC007327.1-201ENST00000447461 264 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 TPT1P12-201ENST00000448968 492 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.36□□□□□ -1.71
HOXD13P35453 HMGB3P22-202ENST00000451823 572 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 NUTF2P7-201ENST00000453086 375 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXD13P35453 RPS26P15-201ENST00000488067 348 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXD13P35453 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXD13P35453 MTCYBP16-201ENST00000509187 1129 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 RNU6-1261P-201ENST00000517194 104 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 AC087369.1-201ENST00000520775 996 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 AP003385.6-201ENST00000531603 374 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD13P35453 AC090502.2-201ENST00000549267 280 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.36□□□□□ -1.71
HOXD13P35453 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD13P35453 AC005412.1-201ENST00000580812 1049 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 AC090616.5-202ENST00000582111 297 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.36□□□□□ -1.71
HOXD13P35453 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD13P35453 AC022509.4-201ENST00000621404 572 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 AC112484.5-201ENST00000624189 228 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 MKKS-204ENST00000639674 192 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HOXD13P35453 MTND4P10-201ENST00000446199 1363 ntBASIC4.36□□□□□ -1.71
HOXD13P35453 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD13P35453 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD13P35453 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD13P35453 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD13P35453 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXD13P35453 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
HOXD13P35453 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HOXD13P35453 NACA3P-201ENST00000359690 648 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 RNU4-68P-201ENST00000364314 141 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 MIR506-201ENST00000384998 124 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HOXD13P35453 RPL21P65-201ENST00000406094 466 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXD13P35453 NANOGP5-201ENST00000424456 877 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 USP12PY-201ENST00000427677 1064 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 RPL31P54-201ENST00000429803 370 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD13P35453 USP9YP31-201ENST00000431405 881 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXD13P35453 OR10R1P-201ENST00000441524 1141 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AL451050.1-201ENST00000450126 415 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC092155.2-201ENST00000454675 477 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 PTGES3P5-201ENST00000455109 434 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 RN7SL385P-201ENST00000468873 276 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC022034.3-201ENST00000471393 478 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 RPS4XP15-201ENST00000489210 795 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 TRAV31-201ENST00000502780 342 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 FTH1P21-201ENST00000512179 511 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 HNRNPKP5-201ENST00000515300 253 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD13P35453 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD13P35453 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXD13P35453 AP000619.3-201ENST00000535634 1127 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD13P35453 AC091516.1-201ENST00000549191 703 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC008127.2-201ENST00000549925 1075 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD13P35453 GNRHR2P1-201ENST00000555315 631 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXD13P35453 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD13P35453 AC138915.2-201ENST00000569776 97 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC091167.4-201ENST00000605079 184 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC016877.3-201ENST00000606778 504 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 RNU4-89P-201ENST00000607443 133 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 AC231759.1-201ENST00000616455 597 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.35□□□□□ -1.71
HOXD13P35453 AC233309.1-201ENST00000619522 751 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HOXD13P35453 AC107982.1-201ENST00000507171 1300 ntBASIC4.35□□□□□ -1.71
HOXD13P35453 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXD13P35453 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD13P35453 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD13P35453 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD13P35453 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD13P35453 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD13P35453 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD13P35453 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms