Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RNU6-24P-201ENST00000384440 107 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 Y_RNA.587-201ENST00000391210 103 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 SNORD3J-201ENST00000408473 190 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC8.28□□□□□ -1.08
HOXD11P31277 RPL12P49-201ENST00000441100 121 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC8.28□□□□□ -1.08
HOXD11P31277 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.28□□□□□ -1.08
HOXD11P31277 RPS23P7-201ENST00000466210 444 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.28□□□□□ -1.08
HOXD11P31277 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.28□□□□□ -1.08
HOXD11P31277 AL137843.1-201ENST00000605078 385 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 CR769775.3-201ENST00000610388 219 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.28□□□□□ -1.08
HOXD11P31277 AC100757.2-201ENST00000622316 280 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 AC007114.2-201ENST00000576014 4281 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.28□□□□□ -1.08
HOXD11P31277 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC8.28□□□□□ -1.08
HOXD11P31277 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.28□□□□□ -1.08
HOXD11P31277 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.28□□□□□ -1.08
HOXD11P31277 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
HOXD11P31277 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
HOXD11P31277 AC239859.1-201ENST00000449715 2594 ntBASIC8.27□□□□□ -1.08
HOXD11P31277 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.27□□□□□ -1.08
HOXD11P31277 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC8.27□□□□□ -1.09
HOXD11P31277 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.27□□□□□ -1.09
HOXD11P31277 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC8.27□□□□□ -1.09
HOXD11P31277 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
HOXD11P31277 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.27□□□□□ -1.09
HOXD11P31277 MIR425-201ENST00000362162 87 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 SNORA66-201ENST00000384792 133 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 U3.37-201ENST00000408528 213 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 RNU2-55P-201ENST00000411146 174 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 RPS26P42-201ENST00000413485 326 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC8.27□□□□□ -1.09
HOXD11P31277 AC019181.1-201ENST00000417151 310 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.27□□□□□ -1.09
HOXD11P31277 AC090515.1-201ENST00000465295 476 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 TUBBP11-201ENST00000472255 252 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 AC022296.2-201ENST00000512424 202 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 RNA5SP290-201ENST00000517133 127 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.27□□□□□ -1.09
HOXD11P31277 IGKV2D-18-201ENST00000519785 375 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 IGLV1-41-201ENST00000519790 406 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 AP004607.1-201ENST00000524456 203 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 COX4I1P1-201ENST00000554239 509 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC8.27□□□□□ -1.09
HOXD11P31277 AC005332.4-201ENST00000592752 579 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
HOXD11P31277 AC016582.3-206ENST00000636547 207 ntBASIC8.27□□□□□ -1.09
HOXD11P31277 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC8.27□□□□□ -1.09
HOXD11P31277 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HOXD11P31277 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.27□□□□□ -1.09
HOXD11P31277 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.27□□□□□ -1.09
HOXD11P31277 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.26□□□□□ -1.09
HOXD11P31277 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
HOXD11P31277 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
HOXD11P31277 RNU1-62P-201ENST00000362599 164 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 RNU6-776P-201ENST00000364403 104 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 RNU6-1022P-201ENST00000365049 104 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 AL357515.1-201ENST00000402967 542 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 MIR320B2-201ENST00000408479 138 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 SNORA19.1-201ENST00000410656 129 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 AL691449.1-201ENST00000426570 421 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 AC073900.1-201ENST00000429766 776 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 AC009237.8-201ENST00000445492 379 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms