Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC007967.1-201ENST00000455422 1159 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 FAM133DP-201ENST00000464802 691 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 RN7SL542P-201ENST00000467147 294 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 S100A11P1-201ENST00000477525 312 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AP000916.1-201ENST00000533869 835 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC027104.1-201ENST00000563702 681 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC006130.2-201ENST00000586202 326 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC112230.1-201ENST00000604342 547 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AL392112.1-201ENST00000605115 829 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC005972.3-201ENST00000606304 481 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC073476.4-201ENST00000628409 72 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AL590396.2-201ENST00000636511 1041 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AL133412.1-201ENST00000380194 2992 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC008432.1-201ENST00000615912 1320 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 ZNF285B-201ENST00000561698 1767 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC017071.1-201ENST00000564407 2204 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 SNORD56.3-201ENST00000363507 71 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 MIR134-201ENST00000385258 73 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 RPL21P17-201ENST00000397467 475 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 RNU6ATAC-201ENST00000408749 126 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 RN7SKP177-201ENST00000410567 355 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 UBE2V1P11-201ENST00000411559 285 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC073310.1-201ENST00000423226 1033 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC007389.2-201ENST00000434630 306 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 HMGB1P48-201ENST00000446155 598 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AL035407.2-201ENST00000454090 378 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AL672167.3-201ENST00000465951 960 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AP000893.1-201ENST00000474462 794 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC126121.1-201ENST00000482313 553 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 RPL21P47-201ENST00000483696 477 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC010306.1-201ENST00000523223 1117 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 MTCO1P49-201ENST00000523429 802 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 GTF2IP22-201ENST00000554443 182 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC037471.2-201ENST00000564941 598 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC093227.2-201ENST00000589357 285 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC245100.7-201ENST00000609678 442 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC006213.5-201ENST00000619673 288 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
HLA-DPB1P04440 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DPB1P04440 AC090337.1-201ENST00000579651 2074 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 MIR16-2-201ENST00000362117 81 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AL359837.1-201ENST00000381357 287 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 PRRC2CP1-201ENST00000404428 159 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AL583834.1-201ENST00000406943 343 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 RAB9AP3-201ENST00000412737 573 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AL356968.1-201ENST00000416622 474 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 RRM2P4-201ENST00000441721 562 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 CDC27P1-201ENST00000445384 715 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 RAB9AP1-201ENST00000449393 573 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AP002884.2-201ENST00000471647 395 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 SNORA26.10-201ENST00000516427 141 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 SNORA70.18-201ENST00000516696 98 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms