Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC092902.1-201ENST00000486999 259 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC011352.3-201ENST00000505162 593 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC025674.1-201ENST00000507074 324 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 RAC1P2-201ENST00000511164 579 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 MTCYBP28-201ENST00000566728 1132 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 MTCO1P40-201ENST00000574371 625 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC006270.2-201ENST00000578523 652 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 BNIP3P19-201ENST00000605397 577 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC120053.1-201ENST00000607706 736 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AP004247.3-201ENST00000608682 624 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 MIR6868-201ENST00000611215 58 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC022149.2-201ENST00000621061 203 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 MIR4496-201ENST00000635896 61 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC025125.1-201ENST00000624743 1922 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 MTND5P28-201ENST00000438005 1594 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AP001148.1-201ENST00000624124 2359 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC068647.1-201ENST00000489539 2265 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 RNA5SP424-201ENST00000390988 115 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC073264.1-201ENST00000411508 416 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 TAF13P2-201ENST00000416876 286 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AL513174.1-201ENST00000423182 629 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AP000907.1-201ENST00000428428 510 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 PSMA2P3-201ENST00000429685 675 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 CKS1BP5-201ENST00000434172 273 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 NDUFB1P1-201ENST00000435191 180 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AL138799.3-201ENST00000438968 350 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 TPT1P12-201ENST00000448968 492 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC009220.1-201ENST00000451614 275 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 NAP1L1P3-201ENST00000462291 880 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC015908.1-201ENST00000478739 476 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC021205.2-201ENST00000480069 347 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 TPT1P3-201ENST00000492841 512 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 SNX5P1-201ENST00000505757 1041 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 MTCO3P27-201ENST00000514397 196 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 RNU6-488P-201ENST00000515918 99 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 RNU5A-7P-201ENST00000515979 116 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 RNU2-27P-201ENST00000516185 142 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 RNA5SP164-201ENST00000516533 110 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AP003355.1-201ENST00000518956 587 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 HIGD1AP5-201ENST00000529959 259 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC006518.2-201ENST00000542513 940 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 CR383656.14-201ENST00000551951 406 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AGGF1P6-201ENST00000569213 976 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AP002906.1-201ENST00000603405 233 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AC092574.1-201ENST00000609771 420 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms