Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC240504.1-201ENST00000395709 845 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 MIR887-201ENST00000401258 79 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AL356968.1-201ENST00000416622 474 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 RPL7P46-201ENST00000425129 740 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 DPPA2P1-201ENST00000428060 556 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC091286.1-201ENST00000431233 461 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC007563.3-201ENST00000433233 371 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 GOT2P5-201ENST00000433995 546 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 HMGB1P45-201ENST00000435986 653 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 HMGB1P12-201ENST00000438594 598 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 TRIM60P18-201ENST00000441518 828 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 RPS27P5-201ENST00000444247 244 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 PDSS1P2-201ENST00000449397 678 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AL672167.3-201ENST00000465951 960 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC108860.1-201ENST00000484521 383 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC093663.1-201ENST00000497190 394 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC006499.5-201ENST00000505037 514 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC118282.1-201ENST00000506408 765 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC108043.1-201ENST00000512696 574 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC119751.1-201ENST00000513357 765 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 RN7SKP234-201ENST00000517173 224 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC067852.3-201ENST00000589177 561 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AC022079.2-201ENST00000619739 566 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AP003072.5-201ENST00000623872 773 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 MTND5P3-201ENST00000438536 1800 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 AL356274.2-201ENST00000624379 3752 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 DDX6P1-205ENST00000441966 1436 ntBASIC2.51□□□□□ -2.01
HLA-DRB4X5D2U9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 RNA5SP197-201ENST00000363357 119 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 MTND4P11-201ENST00000417020 1058 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC012065.2-201ENST00000421295 375 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AL050321.1-201ENST00000432363 400 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AL353705.1-201ENST00000433468 480 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 HMGN2P20-201ENST00000437531 273 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 HIGD1AP11-201ENST00000438361 280 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 Z95327.1-201ENST00000446082 482 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 HMGN2P16-201ENST00000456802 261 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 RNU7-27P-201ENST00000459281 62 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AP002812.1-201ENST00000495378 474 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 RN7SKP157-201ENST00000516174 282 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 RNU4-60P-201ENST00000517239 135 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC007536.1-201ENST00000533382 349 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC006116.7-201ENST00000590141 756 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AL451074.6-201ENST00000608512 729 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 AL354976.1-201ENST00000613843 387 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 SNORD39.4-201ENST00000620099 78 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 LRRC77P-213ENST00000637727 880 ntBASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DRB4X5D2U9 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC093908.1-201ENST00000623125 8092 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AL049781.1-201ENST00000623195 3585 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 CR383658.2-201ENST00000547576 1525 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 RPL7P26-201ENST00000333817 754 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 RNA5SP50-201ENST00000363731 107 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 RN7SKP58-201ENST00000411010 305 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms