Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPS26P40-201ENST00000435209 294 ntBASIC3.8□□□□□ -1.8
SCN11AQ9UI33 AL450263.2-201ENST00000439400 589 ntBASIC3.8□□□□□ -1.8
SCN11AQ9UI33 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 AL512310.1-201ENST00000548639 172 ntBASIC3.8□□□□□ -1.8
SCN11AQ9UI33 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 THAP12P8-201ENST00000447914 2115 ntBASIC3.8□□□□□ -1.8
SCN11AQ9UI33 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN11AQ9UI33 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 RPS12P23-201ENST00000419579 400 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC087499.2-201ENST00000432861 149 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 HMGB3P6-201ENST00000444896 598 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 SLC31A1P1-201ENST00000451221 567 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC126389.1-201ENST00000477436 290 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC083906.5-201ENST00000503722 328 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 RNU6-851P-201ENST00000384565 107 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC006539.3-201ENST00000454258 129 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC079600.2-201ENST00000550076 130 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AL365503.1-201ENST00000605247 905 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC110741.2-201ENST00000605278 268 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 AC007318.2-201ENST00000620999 243 ntBASIC3.79□□□□□ -1.8
SCN11AQ9UI33 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 SPATA2P1-201ENST00000431223 2055 ntBASIC3.78□□□□□ -1.8
SCN11AQ9UI33 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 U3.11-201ENST00000364476 212 ntBASIC3.78□□□□□ -1.8
SCN11AQ9UI33 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 AL035407.1-201ENST00000429211 571 ntBASIC3.78□□□□□ -1.8
SCN11AQ9UI33 AL162389.1-201ENST00000449233 177 ntBASIC3.78□□□□□ -1.8
SCN11AQ9UI33 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 AC091544.4-201ENST00000555268 342 ntBASIC3.78□□□□□ -1.8
SCN11AQ9UI33 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 AL049555.1-201ENST00000562834 1933 ntBASIC3.78□□□□□ -1.8
SCN11AQ9UI33 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN11AQ9UI33 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
SCN11AQ9UI33 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 MIR9-1-201ENST00000385198 89 ntBASIC3.77□□□□□ -1.81
SCN11AQ9UI33 BTF3P9-201ENST00000418784 283 ntBASIC3.77□□□□□ -1.81
SCN11AQ9UI33 AC022018.1-201ENST00000430685 241 ntBASIC3.77□□□□□ -1.81
SCN11AQ9UI33 ARL5AP4-201ENST00000430731 512 ntBASIC3.77□□□□□ -1.81
SCN11AQ9UI33 FTH1P1-201ENST00000437933 532 ntBASIC3.77□□□□□ -1.81
SCN11AQ9UI33 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 AC004832.5-201ENST00000608677 401 ntBASIC3.77□□□□□ -1.81
SCN11AQ9UI33 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 AC021755.1-201ENST00000559747 1447 ntBASIC3.77□□□□□ -1.81
SCN11AQ9UI33 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN11AQ9UI33 MTCO1P8-201ENST00000416914 1523 ntBASIC3.77□□□□□ -1.81
SCN11AQ9UI33 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AMD1P2-201ENST00000412936 992 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 BMS1P22-201ENST00000414726 313 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC003685.2-201ENST00000422795 395 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 GTF2IP23-201ENST00000423746 351 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 NPM1P24-201ENST00000428039 894 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 NPM1P13-201ENST00000452663 865 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 HMGN2P7-201ENST00000456186 273 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 ST13P14-201ENST00000474095 734 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 RFPL4AP3-201ENST00000515267 345 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 RN7SKP272-201ENST00000516988 232 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC109329.2-201ENST00000519658 482 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC015911.5-201ENST00000587076 451 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC078899.5-201ENST00000612475 178 ntBASIC3.76□□□□□ -1.81
SCN11AQ9UI33 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN11AQ9UI33 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms