Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AC062022.1-201ENST00000451026 1684 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 CASC19-228ENST00000641414 1684 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AL158163.1-201ENST00000603915 1649 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 OLFM5P-201ENST00000411807 1478 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 EEF1A1P36-201ENST00000427807 1351 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AL512353.3-201ENST00000417517 1326 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RN7SKP211-201ENST00000363328 315 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNA5-8SP7-201ENST00000363443 155 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 SNORA38B-201ENST00000363524 131 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU6-1155P-201ENST00000363554 107 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 Y_RNA.153-201ENST00000363615 91 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 Y_RNA.276-201ENST00000364732 109 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU1-59P-201ENST00000364829 162 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU6-715P-201ENST00000365204 103 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 Y_RNA.428-201ENST00000384078 102 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU6-214P-201ENST00000384130 107 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU6-190P-201ENST00000384154 102 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU1-46P-201ENST00000384425 164 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU6-505P-201ENST00000384427 107 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 Y_RNA.496-201ENST00000384444 101 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU4-70P-201ENST00000384579 139 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU6-178P-201ENST00000384631 104 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU6-95P-201ENST00000384697 107 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 MIR654-201ENST00000385199 81 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 MIR152-201ENST00000385212 87 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 HMGB3P1-201ENST00000393368 573 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AC110754.1-201ENST00000399740 601 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RPL23AP17-201ENST00000401064 499 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 Y_RNA.594-201ENST00000410373 140 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNU6-1050P-201ENST00000410388 107 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RNA5SP203-201ENST00000410451 136 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AL139135.1-201ENST00000412675 209 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 CTSLP8-201ENST00000413075 967 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 Z99755.1-201ENST00000414048 380 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 UQCRHP2-201ENST00000415651 288 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 UBE2FP1-201ENST00000416536 447 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AC017104.2-201ENST00000417000 321 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RPL7P37-201ENST00000425095 738 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RANP5-201ENST00000427731 655 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 SNX18P14-201ENST00000429308 574 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 MRPS18BP2-201ENST00000434310 759 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AL445928.1-201ENST00000435545 222 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 EIF4A1P11-201ENST00000451239 222 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AC007000.1-201ENST00000453064 794 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AC234775.1-201ENST00000454247 670 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 RPL12P25-201ENST00000455592 494 ntBASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC1.78□□□□□ -2.12
LCE3DQ9BYE3 AL591866.1-201ENST00000456162 401 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms