Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL162739.1-201ENST00000450606 307 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 DHFRP3-201ENST00000455595 559 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC090071.1-201ENST00000507713 644 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MTCO3P42-201ENST00000509488 518 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MTCO3P39-201ENST00000514812 518 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RNU4-57P-201ENST00000515980 135 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SNORA74.3-201ENST00000517108 154 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC025857.1-201ENST00000525252 377 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MIR3613-201ENST00000579844 87 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL133216.2-202ENST00000634512 349 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 Y_RNA.205-201ENST00000364128 113 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 Y_RNA.236-201ENST00000364427 111 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SNORA51.2-201ENST00000364595 132 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RNU2-20P-201ENST00000410425 191 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC098592.2-201ENST00000413158 265 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 BTF3L4P3-201ENST00000418879 476 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 GTF2IP23-201ENST00000423746 351 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC139712.2-201ENST00000424302 339 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL445567.1-201ENST00000439121 144 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL031313.1-201ENST00000448435 256 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 VN1R17P-201ENST00000472048 1090 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RPL7P18-201ENST00000478965 734 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC092824.1-201ENST00000483524 576 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 HMGB1P36-201ENST00000487709 576 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SUMO2P4-201ENST00000504193 276 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC099522.1-202ENST00000514718 367 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 LRRC34P2-201ENST00000514850 553 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RNU6-138P-201ENST00000515952 107 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC008962.1-201ENST00000605729 304 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC011816.2-201ENST00000607089 556 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 snoZ196.1-201ENST00000625269 89 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MIR7978-201ENST00000636158 59 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 FRG1CP-201ENST00000358464 769 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 Y_RNA.71-201ENST00000362892 104 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 RNA5SP72-201ENST00000364442 117 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AL035410.1-201ENST00000427409 427 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AL512649.1-201ENST00000428997 581 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 PRELID3BP10-201ENST00000431957 584 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 GAPDHP25-201ENST00000447061 1001 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AL163540.1-201ENST00000485382 386 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 RN7SL283P-201ENST00000489055 303 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 AC114801.3-201ENST00000510231 177 ntBASIC1.59□□□□□ -2.15
HMCN1Q96RW7 RNU6-539P-201ENST00000516665 103 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms